RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 TOMM5Q8N4H5 51 aa8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 RBPMSQ93062 196 aaKnown RBP8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 CSTL1Q9H114 145 aa8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 VSIRQ9H7M9 311 aa8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 MCUBQ9NWR8 336 aa8.32□□□□□ -1.08
NIPAL3-207ENST00000488155 ANKRD20A5PA0PJZ0 165 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 B3GALNT1O75752 331 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 AKR1C4P17516 323 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 HTR2BP41595 481 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 CMC4P56277 68 aaPredicted RBP8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 IFITM3Q01628 133 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 RBMS2Q15434 407 aaKnown RBP8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 RGS21Q2M5E4 152 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 FAM219AQ8IW50 185 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 METTL26Q96S19 204 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 PRRT1Q99946 306 aa8.31□□□□□ -1.08
NIPAL3-207ENST00000488155 hCG_2014768A0A024R1R8 64 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 RPS10-NUDT3A0A1W2PQS6 291 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 DEFB4AO15263 64 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 LY6G6CO95867 125 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 IGKV1-17P01599 117 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 P2RY1P47900 373 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 RND2P52198 227 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 TMEM187Q14656 261 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 SURF2Q15527 256 aaPredicted RBP8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 PRSS54Q6PEW0 395 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 SLC24A4Q8NFF2 622 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 OR11H2Q8NH07 326 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 OR52E5Q8NH55 327 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 RARRES2Q99969 163 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 TMEM231Q9H6L2 316 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 SCP2D1Q9UJQ7 156 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 KCNIP3Q9Y2W7 256 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 KMT2AQ03164 3969 aa8.3□□□□□ -1.08
NIPAL3-207ENST00000488155 A0A1W2PS18 150 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 CD5P06127 495 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 SULT1A3P0DMM9 295 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 SULT1A4P0DMN0 295 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 FAUP35544 74 aaKnown RBP8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 C2orf83Q53S99 150 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
NIPAL3-207ENST00000488155 TRAV30A0A087WSZ9 112 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NUPR2A6NF83 97 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NAP1L6A6NFF2 107 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 KNCNA6PVL3 124 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 LYRM1O43325 122 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 IFNA10P01566 189 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 IGLC1P0CG04 106 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NPY1RP25929 384 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 CRYBB3P26998 211 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 OR10J1P30954 320 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NANOS2P60321 138 aaKnown RBP8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 ASAH1Q13510 395 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 KLF9Q13886 244 aaPredicted RBP8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 AARDQ4LEZ3 155 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 CEMP1Q6PRD7 247 aaPredicted RBP8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 STHQ8IWL8 128 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 OR1S2Q8NGQ3 325 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 ENKURQ8TC29 256 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 Q8WTZ3 238 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 LINC00476Q8WZB0 136 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NPIPB3Q92617 1050 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 TRIM63Q969Q1 353 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 NARS2Q96I59 477 aaKnown RBP8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 C7orf50Q9BRJ6 194 aaKnown RBP8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 FBXL17Q9UF56 701 aa8.28□□□□□ -1.08
NIPAL3-207ENST00000488155 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 K7EQG2 157 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 PLA2G10O15496 165 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 SUPT4H1P63272 117 aaKnown RBP8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 C4orf46Q504U0 113 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 TMED4Q7Z7H5 227 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 TMEM217Q8N7C4 229 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 GRAMD2BQ96HH9 432 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 SCGB3A2Q96PL1 93 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 RBKSQ9H477 322 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 TBC1D24Q9ULP9 559 aa8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
NIPAL3-207ENST00000488155 A0A0B4J2A0 478 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 PTTG1O95997 202 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 IL4P05112 153 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 SLC25A4P12235 298 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 CCR6P51684 374 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 DHRS2Q13268 280 aa8.26□□□□□ -1.09
NIPAL3-207ENST00000488155 SMCO1Q147U7 214 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms