RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ACY3Q96HD9 319 aa17.64■□□□□ 0.41
RNF38-208ENST00000488058 METTL26Q96S19 204 aa17.64■□□□□ 0.41
RNF38-208ENST00000488058 SDHCQ99643 169 aaPredicted RBP17.64■□□□□ 0.41
RNF38-208ENST00000488058 U3KQ87 197 aa17.64■□□□□ 0.41
RNF38-208ENST00000488058 IFNA4P05014 189 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 HOXB5P09067 269 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 IGLC1P0CG04 106 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 OR10J1P30954 320 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 PAFAH1B2P68402 229 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 FAM90A2PQ658T7 463 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 ZFAND6Q6FIF0 208 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 TMEM231Q9H6L2 316 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 VSIRQ9H7M9 311 aa17.63■□□□□ 0.41
RNF38-208ENST00000488058 CENPXA8MT69 81 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 DFFBO76075 338 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 NDUFB6O95139 128 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 IAPPP10997 89 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 CASC10Q5T4H9 136 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 APRG1Q8IVJ8 170 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 LILRB2Q8N423 598 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 NPIPB3Q92617 1050 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 PAIP2BQ9ULR5 123 aaKnown RBP17.62■□□□□ 0.41
RNF38-208ENST00000488058 FLVCR2Q9UPI3 526 aa17.62■□□□□ 0.41
RNF38-208ENST00000488058 A0A1W2PS18 150 aa17.61■□□□□ 0.41
RNF38-208ENST00000488058 DNASE2O00115 360 aaPredicted RBP17.61■□□□□ 0.41
RNF38-208ENST00000488058 CD5P06127 495 aa17.61■□□□□ 0.41
RNF38-208ENST00000488058 IL7P13232 177 aa17.61■□□□□ 0.41
RNF38-208ENST00000488058 RPL35AP18077 110 aaKnown RBP17.61■□□□□ 0.41
RNF38-208ENST00000488058 Q8WTZ3 238 aa17.61■□□□□ 0.41
RNF38-208ENST00000488058 NARS2Q96I59 477 aaKnown RBP17.61■□□□□ 0.41
RNF38-208ENST00000488058 TMED3Q9Y3Q3 217 aa17.61■□□□□ 0.41
RNF38-208ENST00000488058 PITX3O75364 302 aa17.6■□□□□ 0.41
RNF38-208ENST00000488058 APOC4P55056 127 aa17.6■□□□□ 0.41
RNF38-208ENST00000488058 UBE2MP61081 183 aaKnown RBP17.6■□□□□ 0.41
RNF38-208ENST00000488058 ZNF124Q15973 351 aa17.6■□□□□ 0.41
RNF38-208ENST00000488058 C9orf170A2RU37 121 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 SLC25A6P12236 298 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 CMC4P56277 68 aaPredicted RBP17.59■□□□□ 0.41
RNF38-208ENST00000488058 YPEL3P61236 119 aaPredicted RBP17.59■□□□□ 0.41
RNF38-208ENST00000488058 GGNBP1Q5YKI7 109 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 MAGT1Q9H0U3 335 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 MS4A6AQ9H2W1 248 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 MAP6D1Q9H9H5 199 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 RABAC1Q9UI14 185 aa17.59■□□□□ 0.41
RNF38-208ENST00000488058 MED6O75586 246 aa17.58■□□□□ 0.4
RNF38-208ENST00000488058 CRYBB3P26998 211 aa17.58■□□□□ 0.4
RNF38-208ENST00000488058 P2RY1P47900 373 aa17.58■□□□□ 0.4
RNF38-208ENST00000488058 C7orf50Q9BRJ6 194 aaKnown RBP17.58■□□□□ 0.4
RNF38-208ENST00000488058 FAM90A26D6RGX4 464 aa17.57■□□□□ 0.4
RNF38-208ENST00000488058 IL4P05112 153 aa17.57■□□□□ 0.4
RNF38-208ENST00000488058 STXBP6Q8NFX7 210 aa17.57■□□□□ 0.4
RNF38-208ENST00000488058 GRAMD2BQ96HH9 432 aa17.57■□□□□ 0.4
RNF38-208ENST00000488058 SLC35E1Q96K37 410 aa17.57■□□□□ 0.4
RNF38-208ENST00000488058 WRBO00258 174 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 ADAP1O75689 374 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 HNRNPCP07910 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
RNF38-208ENST00000488058 OR4E1P0C645 316 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 ANXA7P20073 488 aaKnown RBP17.56■□□□□ 0.4
RNF38-208ENST00000488058 BTCP35070 178 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 ATP5IP56385 69 aaPredicted RBP17.56■□□□□ 0.4
RNF38-208ENST00000488058 RAB11AP62491 216 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 C4orf46Q504U0 113 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 STPG3Q8N7X2 389 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 COQ8AQ8NI60 647 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 OVOL2Q9BRP0 275 aa17.56■□□□□ 0.4
RNF38-208ENST00000488058 SYNGR2O43760 224 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 TOMM40O96008 361 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 RD3LP0DJH9 198 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 DHRS2Q13268 280 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 USF2Q15853 346 aaPredicted RBP17.55■□□□□ 0.4
RNF38-208ENST00000488058 DEFB135Q30KP9 77 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 LYG2Q86SG7 212 aa17.55■□□□□ 0.4
RNF38-208ENST00000488058 CIB3Q96Q77 187 aaPredicted RBP17.55■□□□□ 0.4
RNF38-208ENST00000488058 ZFP92A6NM28 416 aa17.54■□□□□ 0.4
RNF38-208ENST00000488058 GPX4P36969 197 aaPredicted RBP17.54■□□□□ 0.4
RNF38-208ENST00000488058 DEFB131AP59861 70 aa17.54■□□□□ 0.4
RNF38-208ENST00000488058 UBE2CO00762 179 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 IFNA21P01568 189 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 PSG1P11464 419 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 GAMTQ14353 236 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 LEMD1Q68G75 181 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 FAM24BQ8N5W8 94 aa17.53■□□□□ 0.4
RNF38-208ENST00000488058 TRAV2A0A0B4J234 112 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 KIR2DL5BA0A0G2JN68 375 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 KIR2DL5BA0A0G2JPC4 375 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 MPTX1A8MV57 137 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 SPRY2O43597 315 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 RPP30P78346 268 aaKnown RBP17.52■□□□□ 0.4
RNF38-208ENST00000488058 Q6ZWC4 215 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 KIR2DL5AQ8N109 375 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 OR51G1Q8NGK1 321 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 KIR2DL5BQ8NHK3 375 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 PBDC1Q9BVG4 233 aa17.52■□□□□ 0.4
RNF38-208ENST00000488058 NBEAL2Q6ZNJ1 2754 aa17.51■□□□□ 0.39
RNF38-208ENST00000488058 H3BP45 60 aa17.51■□□□□ 0.39
RNF38-208ENST00000488058 PLA2G10O15496 165 aa17.51■□□□□ 0.39
RNF38-208ENST00000488058 LYRM1O43325 122 aa17.51■□□□□ 0.39
RNF38-208ENST00000488058 EIF2B2P49770 351 aaKnown RBP17.51■□□□□ 0.39
RNF38-208ENST00000488058 SPANXN5Q5MJ07 72 aa17.51■□□□□ 0.39
RNF38-208ENST00000488058 U3KQE9 123 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms