RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 A0A0G2JRQ6 117 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 RPS10-NUDT3A0A1W2PQS6 291 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 HELTA6NFD8 242 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 IGKV1-17P01599 117 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 CD3DP04234 171 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 RBMY1A1P0DJD3 496 aaKnown RBP6.19□□□□□ -1.42
PRKCB-208ENST00000487674 RBMY1CP0DJD4 496 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 UCP1P25874 307 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 HLA-DMBP28068 263 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 VBP1P61758 197 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 RBMY1FQ15415 496 aaKnown RBP6.19□□□□□ -1.42
PRKCB-208ENST00000487674 AARDQ4LEZ3 155 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 RNASE12Q5GAN4 147 aaKnown RBP6.19□□□□□ -1.42
PRKCB-208ENST00000487674 FAM219AQ8IW50 185 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 AP3S1Q92572 193 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 TMEM230Q96A57 120 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 FUNDC2Q9BWH2 189 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 MTFP1Q9UDX5 166 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 X6R8D5 127 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
PRKCB-208ENST00000487674 TRAV10A0A0B4J240 114 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 KNCNA6PVL3 124 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 FAM25AB3EWG3 89 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 FAM25CB3EWG5 89 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 FAM25GB3EWG6 89 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 HTR2BP41595 481 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 RORCP51449 518 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 SPCS3P61009 180 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 SP6Q3SY56 376 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 TIGITQ495A1 244 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 ACTL10Q5JWF8 245 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 MZT2AQ6P582 158 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 Q6ZTC4 211 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 CENPSQ8N2Z9 138 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 OR1S2Q8NGQ3 325 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 OR13C8Q8NGS7 320 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 OR52E5Q8NH55 327 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 OR52I2Q8NH67 350 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 TERB2Q8NHR7 220 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 ZFAND1Q8TCF1 268 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 GLMPQ8WWB7 406 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 TMEM222Q9H0R3 208 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 TBC1D24Q9ULP9 559 aa6.18□□□□□ -1.42
PRKCB-208ENST00000487674 DNAH6Q9C0G6 4158 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 AMBPP02760 352 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 CD74P04233 296 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 HNRNPCP07910 306 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 SLC25A4P12235 298 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 RND2P52198 227 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 AP2S1P53680 142 aaPredicted RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 TAS2R19P59542 299 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 YPEL3P61236 119 aaPredicted RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 DHRS2Q13268 280 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 MLANAQ16655 118 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 SCGB2B2Q4G0G5 96 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 C2orf83Q53S99 150 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 PSMG4Q5JS54 123 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 PRSS54Q6PEW0 395 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 C16orf54Q6UWD8 224 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 Q6ZRM9 215 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 TMEM229BQ8NBD8 167 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 OR4D10Q8NGI6 311 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 MARCH1Q8TCQ1 289 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 Q8WTZ3 238 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 C15orf40Q8WUR7 153 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 RBPMSQ93062 196 aaKnown RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 ABHD1Q96SE0 405 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 RNF126Q9BV68 326 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 HEYLQ9NQ87 328 aaPredicted RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
PRKCB-208ENST00000487674 CLEC5AQ9NY25 188 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 EXTL2Q9UBQ6 330 aa6.17□□□□□ -1.42
PRKCB-208ENST00000487674 VPS13DQ5THJ4 4388 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 FAM90A26D6RGX4 464 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 GSTZ1O43708 216 aaPredicted RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 GABARAPO95166 117 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 CDS2O95674 445 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 RAB3DO95716 219 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 OR5AC1P0C628 307 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 OR10J1P30954 320 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 NUTF2P61970 127 aaKnown RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 SNRPD3P62318 126 aaKnown RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 SSBP1Q04837 148 aaKnown RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 MEF2DQ14814 521 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 SURF2Q15527 256 aaPredicted RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 USF2Q15853 346 aaPredicted RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 STEAP1BQ6NZ63 245 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 LINC00336Q6ZUF6 198 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 RAB40CQ96S21 281 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 NAA60Q9H7X0 242 aa6.16□□□□□ -1.42
PRKCB-208ENST00000487674 SEPSECSQ9HD40 501 aaKnown RBP6.16□□□□□ -1.42
PRKCB-208ENST00000487674 CACNG5Q9UF02 275 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms