RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SLC35E3Q7Z769 313 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 S100A7AQ86SG5 101 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 OR5T1Q8NG75 326 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 VN1R17PQ8TDU5 208 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 GATAD1Q8WUU5 269 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 NARS2Q96I59 477 aaKnown RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 TXN2Q99757 166 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 MRPL32Q9BYC8 188 aaKnown RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 PRDM13Q9H4Q3 707 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 SLC25A22Q9H936 323 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 MANBALQ9NQG1 85 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 ZNF580Q9UK33 172 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 DMRT1Q9Y5R6 373 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 SOX21Q9Y651 276 aaPredicted RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 ITPR2Q14571 2701 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 IGKV1D-37A0A075B6S9 117 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 IGHV3-21A0A0B4J1V1 117 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 MDFIC2A0A1B0GVS7 189 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 H3BUA1 57 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 COX7A2P2O60397 106 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 NDUFS6O75380 124 aaKnown RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 BRI3O95415 125 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 CXorf1O96002 111 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 AMY1AP04745 511 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 HSPB1P04792 205 aaKnown RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 IGLC1P0CG04 106 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 STAG3L2P0CL84 134 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 STAG3L3P0CL85 134 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 HNF1AP20823 631 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 FCGR2BP31994 310 aaPredicted RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 SRP14P37108 136 aaKnown RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 GCSAMLQ5JQS6 135 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 ZNF506Q5JVG8 444 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 FAM78BQ5VT40 261 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 SPNS3Q6ZMD2 512 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 C19orf35Q6ZS72 473 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 BCL6BQ8N143 479 aaPredicted RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 CIARTQ8N365 385 aaPredicted RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 TMEM86BQ8N661 226 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 NECAP1Q8NC96 275 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 TXNDC17Q9BRA2 123 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 SEC11CQ9BY50 192 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 DNAJC4Q9NNZ3 241 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 ZNF355PQ9NSJ1 428 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 C21orf62Q9NYP8 219 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 TECRQ9NZ01 308 aaKnown RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 MRPL36Q9P0J6 103 aaKnown RBP4.84□□□□□ -1.63
VAMP3-203ENST00000487194 GNG13Q9P2W3 67 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 VPREB3Q9UKI3 123 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 FUT9Q9Y231 359 aa4.84□□□□□ -1.63
VAMP3-203ENST00000487194 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 TRBV9A0A0B4J1U6 114 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 LOC102723971A0A1B0GUV8 181 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 FAM223BA6NKX1 122 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 F8W036 122 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 AP4M1O00189 453 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 GNG7O60262 68 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 HYPMO75409 117 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 OR2J3O76001 311 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 NDUFB8O95169 186 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 TOMM40O96008 361 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 IGHV3-48P01763 117 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 OR5G3P0C626 314 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SFTA3P0C7M3 94 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 C8orf88P0DMB2 117 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 BCL2P10415 239 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 GATA2P23769 480 aaPredicted RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 S100A7P31151 101 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 PLP1P60201 277 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 YPEL3P61236 119 aaPredicted RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 RHOGP84095 191 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SRSF3P84103 164 aaKnown RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF90Q03938 601 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 HAGHQ16775 308 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 Q56UQ5 140 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 C19orf54Q5BKX5 351 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 C10orf113Q5VZT2 155 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 PQLC2Q6ZP29 291 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 FAM223AQ8IWN6 122 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 IQCF2Q8IXL9 164 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 STXBP6Q8NFX7 210 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SUN5Q8TC36 379 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 Q8WTZ3 238 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 EEF1AKMT3Q96AZ1 226 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 LINC00052Q96N35 136 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 ATP6V0BQ99437 205 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SCRT1Q9BWW7 348 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 PRSS22Q9GZN4 317 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 SLC35B3Q9H1N7 401 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM231Q9H6L2 316 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms