RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 FBXL15Q9H469 300 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 NAA60Q9H7X0 242 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 FANCMQ8IYD8 2048 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 GREB1LQ9C091 1923 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 ZNF732B4DXR9 585 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 LY6LH3BQJ8 138 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 TMEM178BH3BS89 294 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 CHEK1O14757 476 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 LMX1BO60663 402 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 WISP3O95389 354 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 CD55P08174 381 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 EDNRAP25101 427 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 FOXA3P55318 350 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 DLX1P56177 255 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 SMIM11AP58511 58 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 RPL23P62829 140 aaKnown RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 LOXL1Q08397 574 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 ELOCQ15369 112 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 Q499Y3 187 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 Q6ZS49 121 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 C2orf91Q6ZV80 131 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 SH2D6Q7Z4S9 175 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 LRTM2Q8N967 370 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 FAM213BQ8TBF2 198 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 FAM173AQ9BQD7 235 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 FZR1Q9UM11 496 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 KCNE3Q9Y6H6 103 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 COL5A3P25940 1745 aaPredicted RBP4.31□□□□□ -1.72
COPS3-209ENST00000486810 DUOX1Q9NRD9 1551 aa4.31□□□□□ -1.72
COPS3-209ENST00000486810 PLXNA1Q9UIW2 1896 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 TECPR2O15040 1411 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 EPM2AB3EWF7 344 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 C16orf97H3BN30 126 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 J3QQQ9 107 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 M0R129 80 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 P0DMU3 169 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 FAM231AP0DMU4 169 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 FAM231CP0DMU5 169 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 BCL2P10415 239 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 ZNF708P17019 499 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 MT3P25713 68 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 HLA-DMBP28068 263 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 UBE2G1P62253 170 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 DYNLT1P63172 113 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 VGLL4Q14135 290 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 MS4A13Q5J8X5 152 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 DMKNQ6E0U4 476 aaPredicted RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 ACP7Q6ZNF0 438 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 TMEM136Q6ZRR5 245 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 WDR31Q8NA23 367 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 NFAM1Q8NET5 270 aaPredicted RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 OR10G8Q8NGN5 311 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 SSC4DQ8WTU2 575 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 ZNF501Q96CX3 271 aaPredicted RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 MRPL53Q96EL3 112 aaKnown RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 CARD19Q96LW7 228 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 SCGB3A2Q96PL1 93 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 OR2A5Q96R48 311 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 TMEM59Q9BXS4 323 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 PARP12Q9H0J9 701 aaKnown RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 LAMTOR3Q9UHA4 124 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 KLF13Q9Y2Y9 288 aaPredicted RBP4.3□□□□□ -1.72
COPS3-209ENST00000486810 VWA8A3KMH1 1905 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 ARFGEF1Q9Y6D6 1849 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 NUMA1Q14980 2115 aa4.3□□□□□ -1.72
COPS3-209ENST00000486810 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
COPS3-209ENST00000486810 ANKRD36A6QL64 1941 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 NRXN3Q9Y4C0 1643 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 NLRC5Q86WI3 1866 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 C3orf85A0A1B0GTC6 90 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 A0A1B0GWB2 263 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 C2orf70A6NJV1 201 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 SDCBPO00560 298 aaPredicted RBP4.29□□□□□ -1.72
COPS3-209ENST00000486810 DEDDO75618 318 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 WISP2O76076 250 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 IGHG2P01859 326 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 CD3DP04234 171 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 PFN2P35080 140 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 MPV17P39210 176 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 PTGDSP41222 190 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 INSL3P51460 131 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 TAS2R45P59539 299 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 PPP1CAP62136 330 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 PPP1CBP62140 327 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 EIF3IQ13347 325 aaKnown RBP4.29□□□□□ -1.72
COPS3-209ENST00000486810 EBI3Q14213 229 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 OR1C1Q15619 314 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 GAGE2AQ6NT46 116 aa4.29□□□□□ -1.72
COPS3-209ENST00000486810 RPS19BP1Q86WX3 136 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms