RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 EMP1P54849 157 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 OR12D2P58182 307 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 ISL1P61371 349 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 BLCAPP62952 87 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 ARL16Q0P5N6 197 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 TCTEX1D1Q8N7M0 179 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 ZNRF1Q8ND25 227 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 OR10G7Q8NGN6 311 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 MUC7Q8TAX7 377 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 VN1R17PQ8TDU5 208 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 GPR148Q8TDV2 347 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 CYGBQ8WWM9 190 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 MBD3L1Q8WWY6 194 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 DLX4Q92988 240 aaPredicted RBP5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SH3BGRL3Q9H299 93 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SAR1AQ9NR31 198 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SCN3BQ9NY72 215 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 ST3GAL6Q9Y274 331 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SORL1Q92673 2214 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 IGKV1D-17A0A075B6S4 117 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 A0A0G2JLM5 398 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 FXYD1O00168 92 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 CCL24O00175 119 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 GABRPO00591 440 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 EVI2AP22794 236 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 CDK2P24941 298 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 TFPI2P48307 235 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 FXYD6P3P58550 94 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 RPL18AQ02543 176 aaKnown RBP5.31□□□□□ -1.56
HDAC3-209ENST00000486618 MORN2Q502X0 79 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 NHLRC3Q5JS37 347 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 KCTD18Q6PI47 426 aaPredicted RBP5.31□□□□□ -1.56
HDAC3-209ENST00000486618 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 OR2T27Q8NH04 317 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 SLAMF6Q96DU3 332 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 NEDD4LQ96PU5 975 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 PBDC1Q9BVG4 233 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 SMIM3Q9BZL3 60 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 C20orf85Q9H1P6 137 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 REEP1Q9H902 201 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 SLC25A19Q9HC21 320 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 NAT8BQ9UHF3 227 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 LAMTOR2Q9Y2Q5 125 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 OR51B2Q9Y5P1 312 aa5.31□□□□□ -1.56
HDAC3-209ENST00000486618 LCE6AA0A183 80 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF850A8MQ14 1090 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 FOXI3A8MTJ6 420 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-209ENST00000486618 M0R2Z0 102 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 GNGT2O14610 69 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 SNAPC5O75971 98 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 NRASP01111 189 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 APOHP02749 345 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TFF1P04155 84 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ORM2P19652 201 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 RAB5AP20339 215 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 BRS3P32247 399 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 RPS27P42677 84 aaKnown RBP5.3□□□□□ -1.56
HDAC3-209ENST00000486618 CFHR3Q02985 330 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 MXD1Q05195 221 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 PRDX4Q13162 271 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TMEM241Q24JQ0 296 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 PYY3Q5JQD4 70 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TPTE2P1Q5T6R2 138 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 MINOS1Q5TGZ0 78 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ASPHD1Q5U4P2 390 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF343Q6P1L6 599 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 FAM57BQ71RH2 274 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 C5orf24Q7Z6I8 188 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 DYNAPQ8N1N2 210 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 OR13A1Q8NGR1 328 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 OR2G3Q8NGZ4 309 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 THEM6Q8WUY1 208 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 OR5P3Q8WZ94 311 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 SLC25A33Q9BSK2 321 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 NDFIP1Q9BT67 221 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TMEM70Q9BUB7 260 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF471Q9BX82 626 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TSSK6Q9BXA6 273 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 NKX6-2Q9C056 277 aaPredicted RBP5.3□□□□□ -1.56
HDAC3-209ENST00000486618 IFI27L2Q9H2X8 130 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 VSIRQ9H7M9 311 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 UQCC1Q9NVA1 299 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 DNAJC27Q9NZQ0 273 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF222Q9UK12 451 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 PRNDQ9UKY0 176 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 TNFSF18Q9UNG2 199 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 MINOS1-NBL1R4GNA1 71 aa5.3□□□□□ -1.56
HDAC3-209ENST00000486618 DNAH9Q9NYC9 4486 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 DSCAML1Q8TD84 2053 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 IFITM5A6NNB3 132 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 C17orf98A8MV24 154 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 ODF3BA8MYP8 253 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 PRR32B1ATL7 298 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms