RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ETFRF1Q6IPR1 90 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 RNASEH2CQ8TDP1 164 aaKnown RBP9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 MFFQ9GZY8 342 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 CACNG5Q9UF02 275 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 SCP2D1Q9UJQ7 156 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 TMEM56-RWDD3S4R434 201 aa9.86□□□□□ -0.83
CTDSP1-208ENST00000482272 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 IFNA4P05014 189 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 P2RY1P47900 373 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 TMBIM6P55061 237 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 YPEL3P61236 119 aaPredicted RBP9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 C11orf45Q8TAV5 145 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 TMEM170AQ8WVE7 144 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 IL22RA2Q969J5 263 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 BCL7BQ9BQE9 202 aa9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 CCDC59Q9P031 241 aaKnown RBP9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 RSL24D1Q9UHA3 163 aaKnown RBP9.85□□□□□ -0.83
CTDSP1-208ENST00000482272 ANKRD20A5PA0PJZ0 165 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 HELTA6NFD8 242 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 K7EQG2 157 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 GSTZ1O43708 216 aaPredicted RBP9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 SULT1A3P0DMM9 295 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 SULT1A4P0DMN0 295 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 OR10J1P30954 320 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 RND2P52198 227 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 RBMS2Q15434 407 aaKnown RBP9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 TMEM41BQ5BJD5 291 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 PRSS54Q6PEW0 395 aa9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 MORN3Q6PF18 240 aaPredicted RBP9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 C11orf68Q9H3H3 251 aaKnown RBP9.84□□□□□ -0.83
CTDSP1-208ENST00000482272 FABP12A6NFH5 140 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 NOL3O60936 208 aaKnown RBP9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 IFNA10P01566 189 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 HNRNPCP07910 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 SOSTQ9BQB4 213 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 SLIRPQ9GZT3 109 aaKnown RBP9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 MCUBQ9NWR8 336 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 U3KQ87 197 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 U3KQE9 123 aa9.83□□□□□ -0.84
CTDSP1-208ENST00000482272 PIGBOS1A0A0B4J2F0 54 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 NXPH3O95157 252 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 SPP1P10451 314 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 ANXA3P12429 323 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 AKR1C4P17516 323 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 NPY1RP25929 384 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 CCR6P51684 374 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 DHRS2Q13268 280 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 C16orf54Q6UWD8 224 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 TRPT1Q86TN4 253 aaKnown RBP9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 DCANP1Q8TF63 244 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 FBXL17Q9UF56 701 aa9.82□□□□□ -0.84
CTDSP1-208ENST00000482272 A0A0B4J2A0 478 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 H3BMQ9 156 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 IL4P05112 153 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 TNFSF8P32971 234 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 SMCO1Q147U7 214 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 NMSQ5H8A3 153 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 LGI3Q8N145 548 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 ACY3Q96HD9 319 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 SHPKQ9UHJ6 478 aa9.81□□□□□ -0.84
CTDSP1-208ENST00000482272 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 DEFB4AO15263 64 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 TOMM40O96008 361 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 FAUP35544 74 aaKnown RBP9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 TCTAP57738 103 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 SRPXP78539 464 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 ACTL10Q5JWF8 245 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 LYZL2Q7Z4W2 148 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 CENPSQ8N2Z9 138 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 C2CD4CQ8TF44 421 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 GLMPQ8WWB7 406 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 RBKSQ9H477 322 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 HSPB7Q9UBY9 170 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
CTDSP1-208ENST00000482272 C11orf94C9JXX5 98 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 BUB3O43684 328 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 MIFP14174 115 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 NUTF2P61970 127 aaKnown RBP9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 OR1S1Q8NH92 325 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 MCFD2Q8NI22 146 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms