RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 RNF183Q96D59 192 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 ACY3Q96HD9 319 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 SOSTQ9BQB4 213 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.18
CPSF4-212ENST00000482251 UBE2CO00762 179 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 IFNA10P01566 189 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 ZNF688P0C7X2 276 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 IGLC1P0CG04 106 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 TNFRSF9Q07011 255 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 RBMS2Q15434 407 aaKnown RBP7.7□□□□□ -1.18
CPSF4-212ENST00000482251 ZNF79Q15937 498 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 NMSQ5H8A3 153 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 TOMM5Q8N4H5 51 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 OR1S2Q8NGQ3 325 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 NPIPB3Q92617 1050 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 IL22RA2Q969J5 263 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 SCGB3A2Q96PL1 93 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 CSTL1Q9H114 145 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 RBKSQ9H477 322 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 TMEM231Q9H6L2 316 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 KCNIP3Q9Y2W7 256 aa7.7□□□□□ -1.18
CPSF4-212ENST00000482251 A0A0B4J2A0 478 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 A0A1W2PS18 150 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 KNCNA6PVL3 124 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 MPTX1A8MV57 137 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 IL4P05112 153 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 IAPPP10997 89 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 SLC25A4P12235 298 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 ANXA3P12429 323 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 VAMP1P23763 118 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 CRYBB3P26998 211 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 FAUP35544 74 aaKnown RBP7.69□□□□□ -1.18
CPSF4-212ENST00000482251 CCR6P51684 374 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 USF2Q15853 346 aaPredicted RBP7.69□□□□□ -1.18
CPSF4-212ENST00000482251 LGI3Q8N145 548 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 OR1S1Q8NH92 325 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 RNASEH2CQ8TDP1 164 aaKnown RBP7.69□□□□□ -1.18
CPSF4-212ENST00000482251 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
CPSF4-212ENST00000482251 HSPB7Q9UBY9 170 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 SHPKQ9UHJ6 478 aa7.69□□□□□ -1.18
CPSF4-212ENST00000482251 TRAV30A0A087WSZ9 112 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 DEFB4AO15263 64 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 CD5P06127 495 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 HNRNPCP07910 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
CPSF4-212ENST00000482251 S100A5P33763 92 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 CMC4P56277 68 aaPredicted RBP7.68□□□□□ -1.18
CPSF4-212ENST00000482251 AP3S2P59780 193 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 SRPXP78539 464 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 STHQ8IWL8 128 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 OR11H2Q8NH07 326 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 Q8WTZ3 238 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 RARRES2Q99969 163 aa7.68□□□□□ -1.18
CPSF4-212ENST00000482251 RBM38Q9H0Z9 239 aaKnown RBP7.68□□□□□ -1.18
CPSF4-212ENST00000482251 PAIP2BQ9ULR5 123 aaKnown RBP7.68□□□□□ -1.18
CPSF4-212ENST00000482251 TRAV2A0A0B4J234 112 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 NUPR2A6NF83 97 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 K7EQG2 157 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 IFNA4P05014 189 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 DHRS2Q13268 280 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 ETFRF1Q6IPR1 90 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 GSG1LQ6UXU4 331 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 DCANP1Q8TF63 244 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 PBDC1Q9BVG4 233 aa7.67□□□□□ -1.18
CPSF4-212ENST00000482251 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
CPSF4-212ENST00000482251 PLECQ15149 4684 aaKnown RBP7.66□□□□□ -1.18
CPSF4-212ENST00000482251 LINC00854A0A1B0GVQ3 168 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 LY6G6CO95867 125 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 TOMM40O96008 361 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 RD3LP0DJH9 198 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 C4BPBP20851 252 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 NANOS2P60321 138 aaKnown RBP7.66□□□□□ -1.18
CPSF4-212ENST00000482251 YPEL3P61236 119 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-212ENST00000482251 PPP1R1AQ13522 171 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 TMEM128Q5BJH2 165 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 PSMG4Q5JS54 123 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 ACTL10Q5JWF8 245 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 CCDC190Q86UF4 302 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 TMEM217Q8N7C4 229 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 OR51G1Q8NGK1 321 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 GATAD1Q8WUU5 269 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 FBXL17Q9UF56 701 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 U3KQ87 197 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 AGRNO00468 2067 aa7.66□□□□□ -1.18
CPSF4-212ENST00000482251 HELTA6NFD8 242 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 ZFP92A6NM28 416 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 HOXB5P09067 269 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 PSG1P11464 419 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 EIF2B2P49770 351 aaKnown RBP7.65□□□□□ -1.18
CPSF4-212ENST00000482251 LYZP61626 148 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 ZNF90Q03938 601 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 OR2F1Q13607 317 aa7.65□□□□□ -1.18
CPSF4-212ENST00000482251 SPANXN2Q5MJ10 180 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms