RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TRAV13-1A0A0B4J241 112 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 A0A0J9YXY3 114 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 MEIS3P1A6NDR6 274 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 EPM2AB3EWF7 344 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 H3BMG7 143 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 RPL36A-HNRNPH2H7BZ11 118 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 SLC25A5P05141 298 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 SRP19P09132 144 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 ZNF883P0CG24 379 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 IL7P13232 177 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 HIST1H1DP16402 221 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 AKR1C2P52895 323 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 CMC4P56277 68 aaPredicted RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 TMEM183BQ1AE95 376 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 SPANXN3Q5MJ09 141 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 SUMF2Q8NBJ7 301 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 SLC25A46Q96AG3 418 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 TBL1YQ9BQ87 522 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 SNRNP25Q9BV90 132 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 MRPL32Q9BYC8 188 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 REG4Q9BYZ8 158 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 FGF23Q9GZV9 251 aaPredicted RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 TUBA4BQ9H853 241 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 CELA1Q9UNI1 258 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 MPC1Q9Y5U8 109 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 ARAP2Q8WZ64 1704 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 KIF26AQ9ULI4 1882 aaPredicted RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 SCAPERQ9BY12 1400 aa2.92□□□□□ -1.94
VPS41-212ENST00000482217 RRBP1Q9P2E9 1410 aaKnown RBP2.92□□□□□ -1.94
VPS41-212ENST00000482217 SVILO95425 2214 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 IGLV8-61A0A075B6I0 122 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 IGHV3OR16-10A0A075B7F0 116 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 A0A1W2PRS3 328 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 IRGMA1A4Y4 181 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 C9JCJ5 164 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 SOCS3O14543 225 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 PITX3O75364 302 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 ZNF324O75467 553 aaPredicted RBP2.91□□□□□ -1.94
VPS41-212ENST00000482217 CST7O76096 145 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 LY6G6DO95868 133 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 C1QAP02745 245 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 IGLC1P0CG04 106 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 LGALS3P17931 250 aaKnown RBP2.91□□□□□ -1.94
VPS41-212ENST00000482217 CRISP3P54108 245 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 GNB2P62879 340 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 QRFPP83859 136 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 C14orf177Q52M58 125 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 AADACL3Q5VUY0 350 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 LYPD2Q6UXB3 125 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 IZUMO2Q6UXV1 221 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 AAED1Q7RTV5 226 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 GTSCR1Q86UQ5 136 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 SLC25A42Q86VD7 318 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 RNF182Q8N6D2 247 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 NPBQ8NG41 125 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 C2orf15Q8WU43 125 aaKnown RBP2.91□□□□□ -1.94
VPS41-212ENST00000482217 GINS4Q9BRT9 223 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 PLA2G12AQ9BZM1 189 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 PLA2G2FQ9BZM2 168 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 ZNF286AQ9HBT8 521 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 FKBP11Q9NYL4 201 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 TAC3Q9UHF0 121 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 MOB4Q9Y3A3 225 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 TNRC6AQ8NDV7 1962 aaKnown RBP2.91□□□□□ -1.94
VPS41-212ENST00000482217 SCN8AQ9UQD0 1980 aa2.91□□□□□ -1.94
VPS41-212ENST00000482217 LRP4O75096 1905 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 IGKV3D-15A0A087WSY6 115 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 TRGV10A0A0A0MS01 117 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 IGHV3-74A0A0B4J1X5 117 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 MUC21A0A0G2JKD1 596 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 A0A0J9YWU9 116 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 OR2T8A6NH00 312 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 A8MWV9 139 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 SOCS1O15524 211 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 TNFP01375 233 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 IGHV3-23P01764 117 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BOP23527 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BBP33778 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 RNASE4P34096 147 aaKnown RBP2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BDP58876 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 TMEM258P61165 79 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 FGF12P61328 243 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BCP62807 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST2H2BEQ16778 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.9□□□□□ -1.95
VPS41-212ENST00000482217 MRPL54Q6P161 138 aaKnown RBP2.9□□□□□ -1.95
VPS41-212ENST00000482217 ZNF705AQ6ZN79 300 aaPredicted RBP2.9□□□□□ -1.95
VPS41-212ENST00000482217 H2AFVQ71UI9 128 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 ATOH7Q8N100 152 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 Q8N7P7 452 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 DAND5Q8N907 189 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 ZFP62Q8NB50 900 aaPredicted RBP2.9□□□□□ -1.95
VPS41-212ENST00000482217 Q8NBF4 154 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 OR8A1Q8NGG7 326 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 OR5H2Q8NGV7 314 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 OR10AC1Q8NH08 325 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BHQ93079 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 HIST1H2BNQ99877 126 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms