RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MLANAQ16655 118 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 C4orf46Q504U0 113 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 SPINK9Q5DT21 86 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 SELENOHQ8IZQ5 122 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 RBPMSQ93062 196 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 RNF183Q96D59 192 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 RRNAD1Q96FB5 475 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 GALNT14Q96FL9 552 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 KCNIP3Q9Y2W7 256 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 U3KQE9 123 aa7.17□□□□□ -1.26
TMEM39A-207ENST00000482162 IGHV3-49A0A0A0MS15 119 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 SNRPGP15A8MWD9 76 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 CLN5O75503 358 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 YIF1AO95070 293 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 APOHP02749 345 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 OR4E1P0C645 316 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 VAMP1P23763 118 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 CRYBB3P26998 211 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 SRPXP78539 464 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 C2orf83Q53S99 150 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 NMSQ5H8A3 153 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 Q6ZNX1 250 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 SLC35G3Q8N808 338 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 TMEM170AQ8WVE7 144 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 TMEM230Q96A57 120 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 GPR146Q96CH1 333 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 GINS3Q9BRX5 216 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 UBQLN2Q9UHD9 624 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 FLVCR2Q9UPI3 526 aa7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 PUS1Q9Y606 427 aaKnown RBP eCLIP7.16□□□□□ -1.26
TMEM39A-207ENST00000482162 DFFBO76075 338 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 HTR2BP41595 481 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 SUPT4H1P63272 117 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 EWSR1Q01844 656 aaKnown RBP eCLIP7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 DHRS2Q13268 280 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 TMEM187Q14656 261 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 TCF24Q7RTU0 167 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 LYG2Q86SG7 212 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 STPG3Q8N7X2 389 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 COQ8AQ8NI60 647 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 ST8SIA2Q92186 375 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 CACFD1Q9UGQ2 172 aa7.15□□□□□ -1.26
TMEM39A-207ENST00000482162 LYSTQ99698 3801 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 TRAV30A0A087WSZ9 112 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 C9orf170A2RU37 121 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 C7orf66A4D0T2 115 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 SFT2D2O95562 160 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 IGLC1P0CG04 106 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 PAFAH1B2P68402 229 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 PPP1R1AQ13522 171 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 ZNF124Q15973 351 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 PRSS54Q6PEW0 395 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 APRG1Q8IVJ8 170 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 PDCD10Q9BUL8 212 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 MS4A6AQ9H2W1 248 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 CACNG5Q9UF02 275 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 ALG5Q9Y673 324 aa7.14□□□□□ -1.27
TMEM39A-207ENST00000482162 IGHV3OR16-13A0A075B7E8 117 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 IGHV3-74A0A0B4J1X5 117 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 A0A0B4J2A0 478 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 A0A0J9YWU9 116 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 DUXBA0A1W2PPF3 345 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 MPTX1A8MV57 137 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 SSNA1O43805 119 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 SLC25A4P12235 298 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 NPPCP23582 126 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 HOXA1P49639 335 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 YPEL3P61236 119 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 TMEM268Q5VZI3 342 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 LGI3Q8N145 548 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 MITD1Q8WV92 249 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 SHPKQ9UHJ6 478 aa7.13□□□□□ -1.27
TMEM39A-207ENST00000482162 RPS10-NUDT3A0A1W2PQS6 291 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 A0A1W2PS18 150 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 K7EQG2 157 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 PITX3O75364 302 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 JTBO76095 146 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 NXPH3O95157 252 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 GIG44P09565 113 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 SULT1A3P0DMM9 295 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 SULT1A4P0DMN0 295 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 OPRK1P41145 380 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 TFPI2P48307 235 aa7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 ATP5IP56385 69 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-207ENST00000482162 TIGITQ495A1 244 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms