RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GNG7O60262 68 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 NDUFC2O95298 119 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 ZNF682O95780 498 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 HLA-DRB1P01911 266 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 EVX1P49640 407 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 OCIAD2Q56VL3 154 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 IBA57Q5T440 356 aaKnown RBP2.11□□□□□ -2.07
SF3B1-210ENST00000482158 LGALS9CQ6DKI2 356 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 ATP5L2Q7Z4Y8 100 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 BAP18Q8IXM2 172 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM86AQ8N2M4 240 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 EXOC3-AS1Q8N2X6 119 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 ANKRD29Q8N6D5 301 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 OR5A1Q8NGJ0 315 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 PPP3R2Q96LZ3 170 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 LINC00470Q9BZP3 86 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 GPR84Q9NQS5 396 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 ERG28Q9UKR5 140 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 PCYT1BQ9Y5K3 369 aaPredicted RBP2.11□□□□□ -2.07
SF3B1-210ENST00000482158 PXMP4Q9Y6I8 212 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 SLX4Q8IY92 1834 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 BCL9LQ86UU0 1499 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 KIAA1551Q9HCM1 1747 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 ANKRD26Q9UPS8 1709 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 IBTKQ9P2D0 1353 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-210ENST00000482158 CITO14578 2027 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 TECPR2O15040 1411 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 CUL7Q14999 1698 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 hCG_1818297A0A087WSY0 165 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 TMED7-TICAM2A0A0A6YYA0 188 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 IGHV3-73A0A0B4J1V6 119 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 TRAV4A0A0B4J268 109 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 A0A0J9YY10 115 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 A0A1B0GX78 115 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 A8MT66 165 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 F6UZH7 168 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 AIPO00170 330 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 FAM107AO95990 144 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 C8GP07360 202 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 SLC25A16P16260 332 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 S100A11P31949 105 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 G6PCP35575 357 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 ATP5G3P48201 142 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 ZNF140P52738 457 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-210ENST00000482158 DEFA3P59666 94 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 PSG9Q00887 426 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 HIST1H1AQ02539 215 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-210ENST00000482158 RHEBQ15382 184 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 DEFB128Q7Z7B8 93 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 MALSU1Q96EH3 234 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 PDCD10Q9BUL8 212 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 SMIM3Q9BZL3 60 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 PBOV1Q9GZY1 135 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 LPAR5Q9H1C0 372 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 MED11Q9P086 117 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 ANAPC10Q9UM13 185 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 LAMTOR2Q9Y2Q5 125 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 MYH6P13533 1939 aa2.1□□□□□ -2.07
SF3B1-210ENST00000482158 DICER1Q9UPY3 1922 aaKnown RBP2.1□□□□□ -2.07
SF3B1-210ENST00000482158 EML6Q6ZMW3 1958 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 A0A1B0GW64 132 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 DUXBA0A1W2PPF3 345 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 DHRS12A0PJE2 317 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 OR4C45A6NMZ5 311 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 C9JAW5 83 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 MRASO14807 208 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 GGCTO75223 188 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 OR2H2O95918 312 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 RPS4Y1P22090 263 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 EVI2AP22794 236 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 TAS2R30P59541 319 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 SELENOWP63302 87 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 MRPS10P82664 201 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 HRCT1Q6UXD1 115 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 PDZD9Q8IXQ8 264 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 C12orf45Q8N5I9 185 aaPredicted RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 SLC7A6Q92536 515 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 ARL11Q969Q4 196 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 ADAT3Q96EY9 351 aaPredicted RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 TP53RKQ96S44 253 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 LXNQ9BS40 222 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 OR2H1Q9GZK4 316 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 EIF5A2Q9GZV4 153 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 CACYBPQ9HB71 228 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 TXNL4BQ9NX01 149 aaKnown RBP2.09□□□□□ -2.07
SF3B1-210ENST00000482158 NAT8BQ9UHF3 227 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 TNFSF18Q9UNG2 199 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 HIGD1AQ9Y241 93 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 COQ4Q9Y3A0 265 aa2.09□□□□□ -2.07
SF3B1-210ENST00000482158 CCDC88AQ3V6T2 1871 aa2.09□□□□□ -2.08
SF3B1-210ENST00000482158 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
SF3B1-210ENST00000482158 OVOS2A0A0G2JMS6 1433 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 TCOF1Q13428 1488 aaKnown RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 ABCC10Q5T3U5 1492 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 NYNRINQ9P2P1 1898 aaKnown RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 TRAV8-1A0A0A6YYK1 113 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 C20orf202A1L168 122 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms