RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 HIST1H1EP10412 219 aaKnown RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 SRIP30626 198 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 PRRX1P54821 245 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 TBR1Q16650 682 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 VN1R17PQ8TDU5 208 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 IGHV1-69-2A0A0G2JMI3 117 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 REG1AP05451 166 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 AMTP48728 403 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 NUTF2P61970 127 aaKnown RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 KIAA1644Q3SXP7 199 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 OR1B1Q8NGR6 318 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 MIEN1Q9BRT3 115 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 TBL2Q9Y4P3 447 aaKnown RBP12.36□□□□□ -0.43
C9orf3-218ENST00000482056 TTC28Q96AY4 2481 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 SPENQ96T58 3664 aaKnown RBP12.35□□□□□ -0.43
C9orf3-218ENST00000482056 IGLC7A0M8Q6 106 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 BMPR1BO00238 502 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 IGHV3-48P01763 117 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
C9orf3-218ENST00000482056 CRYGCP07315 174 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 ORM2P19652 201 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 CDKN1AP38936 164 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 KRTDAPP60985 99 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 PVRIGQ6DKI7 326 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 SNHG12Q9BXW3 62 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 TPSG1Q9NRR2 321 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 EPDR1Q9UM22 224 aa12.35□□□□□ -0.43
C9orf3-218ENST00000482056 HYPMO75409 117 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 FSTL3O95633 263 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 CD33P20138 364 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 RAB4AP20338 218 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 TNXAQ16473 311 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 NUDT10Q8NFP7 164 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 OR4B1Q8NGF8 309 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 NUDT11Q96G61 164 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 ZNF835Q9Y2P0 537 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 SHISA9B4DS77 424 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 DIRC3C9JPN6 131 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 TCAPO15273 167 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-218ENST00000482056 MYCNOSP40205 109 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 RBPJQ06330 500 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 HCP5Q6MZN7 132 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 SSBP3Q9BWW4 388 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-218ENST00000482056 NRN1Q9NPD7 142 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
C9orf3-218ENST00000482056 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
C9orf3-218ENST00000482056 FBXL7Q9UJT9 491 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 ZFHX4Q86UP3 3567 aa12.34□□□□□ -0.43
C9orf3-218ENST00000482056 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 A0A1W2PS18 150 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 E7EQL1 145 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 MOSP00540 346 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 PLAUP00749 431 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-218ENST00000482056 PMCHP20382 165 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-218ENST00000482056 CA7P43166 264 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-218ENST00000482056 MFAP2P55001 183 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 CASP6P55212 293 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 TMEM116Q8NCL8 245 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 RALYQ9UKM9 306 aaKnown RBP12.33□□□□□ -0.44
C9orf3-218ENST00000482056 PAM16Q9Y3D7 125 aa12.33□□□□□ -0.44
C9orf3-218ENST00000482056 NAV3Q8IVL0 2385 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 B9A039 149 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 C22orf46C9J442 243 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 PAX2Q02962 417 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 MRGPRG-AS1Q2M3A8 158 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 FAM168AQ92567 244 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 RITA1Q96K30 269 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 INSIG2Q9Y5U4 225 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 PGPA6NDG6 321 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 DMRTC2Q8IXT2 367 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-218ENST00000482056 NUP35Q8NFH5 326 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 BORCS7Q96B45 105 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 FMC1Q96HJ9 113 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 GPR82Q96P67 336 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 KLF12Q9Y4X4 402 aa12.32□□□□□ -0.44
C9orf3-218ENST00000482056 CD3EP07766 207 aa12.31□□□□□ -0.44
C9orf3-218ENST00000482056 GNG5P63218 68 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms