RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 DEFB135Q30KP9 77 aa11.13□□□□□ -0.63
PRKN-207ENST00000479615 TMEM128Q5BJH2 165 aa11.13□□□□□ -0.63
PRKN-207ENST00000479615 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
PRKN-207ENST00000479615 HSPB7Q9UBY9 170 aa11.13□□□□□ -0.63
PRKN-207ENST00000479615 IGKV3-7A0A075B6H7 116 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 HELTA6NFD8 242 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
PRKN-207ENST00000479615 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 PYDC2Q56P42 97 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 TMEM41BQ5BJD5 291 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
PRKN-207ENST00000479615 NUPR2A6NF83 97 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 CCDC160A6NGH7 325 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 IFNA10P01566 189 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
PRKN-207ENST00000479615 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
PRKN-207ENST00000479615 OR10J1P30954 320 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
PRKN-207ENST00000479615 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
PRKN-207ENST00000479615 MLANAQ16655 118 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 LYG2Q86SG7 212 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
PRKN-207ENST00000479615 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
PRKN-207ENST00000479615 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 SLC25A6P12236 298 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
PRKN-207ENST00000479615 P2RY1P47900 373 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 RND2P52198 227 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 TIGITQ495A1 244 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 TRIM63Q969Q1 353 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
PRKN-207ENST00000479615 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 FABP1P07148 127 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 HNRNPCP07910 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRKN-207ENST00000479615 RD3LP0DJH9 198 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
PRKN-207ENST00000479615 SPANXN2Q5MJ10 180 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 OR1S1Q8NH92 325 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 SEPSECSQ9HD40 501 aaKnown RBP11.09□□□□□ -0.63
PRKN-207ENST00000479615 U3KQE9 123 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 CSMD3Q7Z407 3707 aa11.09□□□□□ -0.63
PRKN-207ENST00000479615 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 K7EQG2 157 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 MED6O75586 246 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 TOMM40O96008 361 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 IFNA4P05014 189 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 DEFB131AP59861 70 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 UBE2MP61081 183 aaKnown RBP11.08□□□□□ -0.64
PRKN-207ENST00000479615 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
PRKN-207ENST00000479615 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 STHQ8IWL8 128 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 NPIPB3Q92617 1050 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
PRKN-207ENST00000479615 RARRES2Q99969 163 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 KLK5Q9Y337 293 aaPredicted RBP11.08□□□□□ -0.64
PRKN-207ENST00000479615 TMED3Q9Y3Q3 217 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 V9GYH0 126 aa11.08□□□□□ -0.64
PRKN-207ENST00000479615 IL4P05112 153 aa11.07□□□□□ -0.64
PRKN-207ENST00000479615 RAB11AP62491 216 aa11.07□□□□□ -0.64
PRKN-207ENST00000479615 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
PRKN-207ENST00000479615 CCDC190Q86UF4 302 aa11.07□□□□□ -0.64
PRKN-207ENST00000479615 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
PRKN-207ENST00000479615 RBKSQ9H477 322 aa11.07□□□□□ -0.64
PRKN-207ENST00000479615 NAP1L6A6NFF2 107 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 PITX3O75364 302 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 SPP1P10451 314 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 VAMP1P23763 118 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
PRKN-207ENST00000479615 RBMS2Q15434 407 aaKnown RBP11.06□□□□□ -0.64
PRKN-207ENST00000479615 ZNF79Q15937 498 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 CEMP1Q6PRD7 247 aaPredicted RBP11.06□□□□□ -0.64
PRKN-207ENST00000479615 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 OR51G1Q8NGK1 321 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 DCANP1Q8TF63 244 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 ACY3Q96HD9 319 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 STARD9Q9P2P6 4700 aa11.06□□□□□ -0.64
PRKN-207ENST00000479615 NXPH3O95157 252 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 SFT2D2O95562 160 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
PRKN-207ENST00000479615 INPP1P49441 399 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 ZNF124Q15973 351 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 LEMD1Q68G75 181 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 GLMPQ8WWB7 406 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 SLC35E1Q96K37 410 aa11.05□□□□□ -0.64
PRKN-207ENST00000479615 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms