RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TMEM133Q9H2Q1 129 aa19.8■□□□□ 0.76
SYNGAP1-206ENST00000479510 TNFRSF19Q9NS68 423 aa19.8■□□□□ 0.76
SYNGAP1-206ENST00000479510 ZNF835Q9Y2P0 537 aa19.8■□□□□ 0.76
SYNGAP1-206ENST00000479510 KLF12Q9Y4X4 402 aa19.8■□□□□ 0.76
SYNGAP1-206ENST00000479510 CORTO00230 105 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 CDKN1AP38936 164 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 OR4B1Q8NGF8 309 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 ICE1Q9Y2F5 2266 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 A0A1W2PS18 150 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 HIST1H1EP10412 219 aaKnown RBP19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 SRIP30626 198 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 COMPP49747 757 aaPredicted RBP19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 DYNLRB1Q9NP97 96 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 FBXL7Q9UJT9 491 aa19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 TBL2Q9Y4P3 447 aaKnown RBP19.79■□□□□ 0.76
SYNGAP1-206ENST00000479510 SLC35B1P78383 322 aa19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 TMEM116Q8NCL8 245 aa19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 VN1R17PQ8TDU5 208 aa19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 LINC00479Q96M42 142 aa19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 MRPL36Q9P0J6 103 aaKnown RBP19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 EPDR1Q9UM22 224 aa19.78■□□□□ 0.76
SYNGAP1-206ENST00000479510 CD33P20138 364 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 ATP5L2Q7Z4Y8 100 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 NUDT10Q8NFP7 164 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 TSKUQ8WUA8 353 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 TMEM190Q8WZ59 177 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 NUDT11Q96G61 164 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 NEU1Q99519 415 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 NRN1Q9NPD7 142 aa19.77■□□□□ 0.76
SYNGAP1-206ENST00000479510 TCAPO15273 167 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 ZNF324O75467 553 aaPredicted RBP19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 CRYGBP07316 175 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 AMTP48728 403 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 PLP1P60201 277 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 GFRALQ6UXV0 394 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 C11orf42Q8N5U0 333 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 C7orf69Q9H7B7 122 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 LOC400499M0QZD8 3231 aa19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 EP300Q09472 2414 aaPredicted RBP19.77■□□□□ 0.75
SYNGAP1-206ENST00000479510 C22orf46C9J442 243 aa19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 CA7P43166 264 aa19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 RPL27AP46776 148 aaKnown RBP19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 KIAA1644Q3SXP7 199 aa19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 C19orf35Q6ZS72 473 aa19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 FAM168AQ92567 244 aa19.76■□□□□ 0.75
SYNGAP1-206ENST00000479510 SHISA9B4DS77 424 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 PRRX1P54821 245 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 CASP6P55212 293 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 UBE2G1P62253 170 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 NHLRC2Q8NBF2 726 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 TPSG1Q9NRR2 321 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 CUL9Q8IWT3 2517 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 Q8N976 141 aa19.75■□□□□ 0.75
SYNGAP1-206ENST00000479510 DIRC3C9JPN6 131 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 ENSAO43768 121 aaKnown RBP19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 HYPMO75409 117 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 KLF5Q13887 457 aaPredicted RBP19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 ZNF705AQ6ZN79 300 aaPredicted RBP19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 NUP35Q8NFH5 326 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 RITA1Q96K30 269 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 IGHV1-69-2A0A0G2JMI3 117 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 OR2J3O76001 311 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 CA1P00915 261 aaPredicted RBP19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 ABHD17AQ96GS6 310 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 TMEM68Q96MH6 324 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 GPR82Q96P67 336 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 RBM14Q96PK6 669 aaKnown RBP19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 RCHY1Q96PM5 261 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 ZNF318Q5VUA4 2279 aa19.74■□□□□ 0.75
SYNGAP1-206ENST00000479510 E7EQL1 145 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 MFAP2P55001 183 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 KRTDAPP60985 99 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 TDRG1Q3Y452 100 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 CT83Q5H943 113 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 OR1B1Q8NGR6 318 aa19.73■□□□□ 0.75
SYNGAP1-206ENST00000479510 TRAV34A0A0B4J273 112 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 IGLV1-47P01700 117 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 IGHV3-48P01763 117 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 RBP4P02753 201 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 SLC25A5P05141 298 aaKnown RBP19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 ORM2P19652 201 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 SLAQ13239 276 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 C5orf17Q8NAS9 161 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 C18orf32Q8TCD1 76 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 ATG101Q9BSB4 218 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 FAM103A1Q9BTL3 118 aaKnown RBP19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 SSBP3Q9BWW4 388 aaPredicted RBP19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 RALYQ9UKM9 306 aaKnown RBP19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 SIGLEC9Q9Y336 463 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 PAM16Q9Y3D7 125 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 B9A039 149 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 NBEAP1P0C6P0 100 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 Q8NA96 180 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 FMC1Q96HJ9 113 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 MLST8Q9BVC4 326 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 ZNF492Q9P255 531 aa19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 SOX21Q9Y651 276 aaPredicted RBP19.72■□□□□ 0.75
SYNGAP1-206ENST00000479510 TOMM40O96008 361 aa19.71■□□□□ 0.75
SYNGAP1-206ENST00000479510 APOBEC3AP31941 199 aaPredicted RBP19.71■□□□□ 0.75
SYNGAP1-206ENST00000479510 C8orf46Q8TAG6 207 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms