RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TIRAPP58753 221 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 LILRA6Q6PI73 481 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 Q6ZVH6 145 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 BCL6BQ8N143 479 aaPredicted RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 DEFB124Q8NES8 71 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 PDFQ9HBH1 243 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 FREM1Q5H8C1 2179 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 LINC01553A4QN01 128 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 FABP5Q01469 135 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 ALS2Q96Q42 1657 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 J3KT08 172 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 UBE2CO00762 179 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 SLC25A16P16260 332 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 ETDBQ3ZM63 59 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 AMN1Q8IY45 258 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 RFESDQ8TAC1 157 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 RLFQ13129 1914 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 IGLV3-22A0A075B6J6 115 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 IGHV3-15A0A0B4J1V0 119 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 NBR2O15453 112 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 NCR2O95944 276 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 NGFRP08138 427 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 CCL1P22362 96 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 PPIFP30405 207 aaKnown RBP4.57□□□□□ -1.68
USF3-202ENST00000478658 C12orf76Q8N812 135 aaPredicted RBP4.57□□□□□ -1.68
USF3-202ENST00000478658 IGFBP3P17936 291 aaPredicted RBP4.57□□□□□ -1.68
USF3-202ENST00000478658 TMEM144Q7Z5S9 345 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 PUSL1Q8N0Z8 303 aaKnown RBP4.57□□□□□ -1.68
USF3-202ENST00000478658 ZNF385DQ9H6B1 395 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 A0A1W2PRF3 423 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 A0A1W2PRM7 423 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 CLPSP04118 112 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 C15orf53Q8NAA6 179 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 OR8D4Q8NGM9 314 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 TANC2Q9HCD6 1990 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 TRAV25A0A0B4J276 109 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 D6R8Y8 96 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 LINC00303Q3SY05 128 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 IGHV3-43A0A0B4J1X8 118 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 IGF2P01344 180 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 IGHV3-43DP0DP04 118 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 ODF1Q14990 250 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 TMEFF2Q9UIK5 374 aaPredicted RBP4.57□□□□□ -1.68
USF3-202ENST00000478658 LINC00312Q9Y6C7 94 aa4.57□□□□□ -1.68
USF3-202ENST00000478658 ATRXP46100 2492 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 USP17L23D6RBM5 183 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 J3QLI3 93 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 CDIPTO14735 213 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 TEN1Q86WV5 123 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PPDPFLQ8WWR9 84 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 RNASE6Q93091 150 aaKnown RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 LINC00479Q96M42 142 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 A0A0G2JNJ9 132 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 F8W1H4 67 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 TM4SF4P48230 202 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 Q9UFV3 132 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 CTSBP07858 339 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PFN3P60673 137 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 RND3P61587 244 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 C8orf82Q6P1X6 216 aaPredicted RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 Q6ZNB5 142 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 KLK13Q9UKR3 277 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 KDM3BQ7LBC6 1761 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 A0A0A6YYD5 115 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 H0YGX0 51 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 EFEMP2O95967 443 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PLPPR2Q96GM1 343 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 C7orf69Q9H7B7 122 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 ZNF71Q9NQZ8 489 aaPredicted RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 A0A1W2PRE2 83 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 TRBV12-3P01733 135 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 CCL18P55774 89 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 FAM27BQ5VT28 67 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 FAM219BQ5XKK7 198 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 Q6ZPB1 254 aaPredicted RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 RFLNAQ6ZTI6 216 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 DYNAPQ8N1N2 210 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 ZNF784Q8NCA9 323 aaPredicted RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 UPK3BQ9BT76 320 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 TMEM243Q9BU79 118 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 ZDBF2Q9HCK1 2354 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 RALGAPA2Q2PPJ7 1873 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 UBR3Q6ZT12 1888 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 SHISA9B4DS77 424 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 NDUFB8O95169 186 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRR20EP86478 221 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRR20CP86479 221 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRR20DP86480 221 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRR20BP86481 221 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRR20AP86496 221 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 ZXDCQ2QGD7 858 aaPredicted RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 SLC25A47Q6Q0C1 308 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 C10orf105Q8TEF2 133 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PNRC2Q9NPJ4 139 aaKnown RBP4.56□□□□□ -1.68
USF3-202ENST00000478658 SHANK3Q9BYB0 1731 aa4.56□□□□□ -1.68
USF3-202ENST00000478658 PRRC2AP48634 2157 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms