RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 KLK5Q9Y337 293 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-216ENST00000478603 TMEM56-RWDD3S4R434 201 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 TRAV30A0A087WSZ9 112 aa16.69■□□□□ 0.26
C9orf3-216ENST00000478603 K7EQG2 157 aa16.69■□□□□ 0.26
C9orf3-216ENST00000478603 IGLC1P0CG04 106 aa16.69■□□□□ 0.26
C9orf3-216ENST00000478603 TMEM187Q14656 261 aa16.69■□□□□ 0.26
C9orf3-216ENST00000478603 RABL2AQ9UBK7 228 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-216ENST00000478603 RABL2BQ9UNT1 228 aa16.69■□□□□ 0.26
C9orf3-216ENST00000478603 DEFB4AO15263 64 aa16.68■□□□□ 0.26
C9orf3-216ENST00000478603 GSTZ1O43708 216 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-216ENST00000478603 TMBIM6P55061 237 aa16.68■□□□□ 0.26
C9orf3-216ENST00000478603 NANOS2P60321 138 aaKnown RBP16.68■□□□□ 0.26
C9orf3-216ENST00000478603 STHQ8IWL8 128 aa16.68■□□□□ 0.26
C9orf3-216ENST00000478603 OR1S2Q8NGQ3 325 aa16.68■□□□□ 0.26
C9orf3-216ENST00000478603 RNASEH2CQ8TDP1 164 aaKnown RBP16.68■□□□□ 0.26
C9orf3-216ENST00000478603 NARS2Q96I59 477 aaKnown RBP16.68■□□□□ 0.26
C9orf3-216ENST00000478603 ZNF688P0C7X2 276 aa16.67■□□□□ 0.26
C9orf3-216ENST00000478603 SLC25A4P12235 298 aa16.67■□□□□ 0.26
C9orf3-216ENST00000478603 OR10J1P30954 320 aa16.67■□□□□ 0.26
C9orf3-216ENST00000478603 MCUBQ9NWR8 336 aa16.67■□□□□ 0.26
C9orf3-216ENST00000478603 KNCNA6PVL3 124 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 SULT1A3P0DMM9 295 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 SULT1A4P0DMN0 295 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 NPY1RP25929 384 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 C11orf45Q8TAV5 145 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 DCANP1Q8TF63 244 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 Q8WTZ3 238 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 GRAMD2BQ96HH9 432 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 BCL7BQ9BQE9 202 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 SLIRPQ9GZT3 109 aaKnown RBP16.66■□□□□ 0.26
C9orf3-216ENST00000478603 C11orf68Q9H3H3 251 aaKnown RBP16.66■□□□□ 0.26
C9orf3-216ENST00000478603 FBXL17Q9UF56 701 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 SCP2D1Q9UJQ7 156 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 KCNIP3Q9Y2W7 256 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 U3KQE9 123 aa16.66■□□□□ 0.26
C9orf3-216ENST00000478603 AKR1C4P17516 323 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 TNFSF8P32971 234 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 YPEL3P61236 119 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-216ENST00000478603 NMSQ5H8A3 153 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 TRPT1Q86TN4 253 aaKnown RBP16.65■□□□□ 0.26
C9orf3-216ENST00000478603 NPIPB3Q92617 1050 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 IL22RA2Q969J5 263 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 ACY3Q96HD9 319 aa16.65■□□□□ 0.26
C9orf3-216ENST00000478603 RSL24D1Q9UHA3 163 aaKnown RBP16.65■□□□□ 0.26
C9orf3-216ENST00000478603 H3BMQ9 156 aa16.64■□□□□ 0.25
C9orf3-216ENST00000478603 HNRNPCP07910 306 aaKnown RBP eCLIP16.64■□□□□ 0.255e-8■■□□□ 13.5
C9orf3-216ENST00000478603 GIG44P09565 113 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-216ENST00000478603 SUPT4H1P63272 117 aaKnown RBP16.64■□□□□ 0.25
C9orf3-216ENST00000478603 USF2Q15853 346 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-216ENST00000478603 LYZL2Q7Z4W2 148 aa16.64■□□□□ 0.25
C9orf3-216ENST00000478603 SOSTQ9BQB4 213 aa16.64■□□□□ 0.25
C9orf3-216ENST00000478603 FABP12A6NFH5 140 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 IFNA10P01566 189 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 IL4P05112 153 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 DHRS2Q13268 280 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 ETFRF1Q6IPR1 90 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 C16orf54Q6UWD8 224 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 GLMPQ8WWB7 406 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 SCGB3A2Q96PL1 93 aa16.63■□□□□ 0.25
C9orf3-216ENST00000478603 NOL3O60936 208 aaKnown RBP16.62■□□□□ 0.25
C9orf3-216ENST00000478603 C4BPBP20851 252 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 SMCO1Q147U7 214 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 ACTL10Q5JWF8 245 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 MCFD2Q8NI22 146 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 MFFQ9GZY8 342 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 RBKSQ9H477 322 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 HSPB7Q9UBY9 170 aa16.62■□□□□ 0.25
C9orf3-216ENST00000478603 A0A0B4J2A0 478 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 HELTA6NFD8 242 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 CCR6P51684 374 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 NOXA1Q86UR1 476 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 DTD1Q8TEA8 209 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 SHPKQ9UHJ6 478 aa16.61■□□□□ 0.25
C9orf3-216ENST00000478603 KMT2AQ03164 3969 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 TOMM40O96008 361 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 RD3LP0DJH9 198 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 EIF2B2P49770 351 aaKnown RBP16.6■□□□□ 0.25
C9orf3-216ENST00000478603 PSMG4Q5JS54 123 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 LGI3Q8N145 548 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 RPP25LQ8N5L8 163 aaKnown RBP16.6■□□□□ 0.25
C9orf3-216ENST00000478603 Q8NAQ8 132 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 CACFD1Q9UGQ2 172 aa16.6■□□□□ 0.25
C9orf3-216ENST00000478603 IFNA4P05014 189 aa16.59■□□□□ 0.25
C9orf3-216ENST00000478603 SPP1P10451 314 aa16.59■□□□□ 0.25
C9orf3-216ENST00000478603 PSG1P11464 419 aa16.59■□□□□ 0.25
C9orf3-216ENST00000478603 MORN3Q6PF18 240 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-216ENST00000478603 CLEC5AQ9NY25 188 aa16.59■□□□□ 0.25
C9orf3-216ENST00000478603 U3KQ87 197 aa16.59■□□□□ 0.25
C9orf3-216ENST00000478603 DEDDO75618 318 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 RBMY1A1P0DJD3 496 aaKnown RBP16.58■□□□□ 0.24
C9orf3-216ENST00000478603 RBMY1CP0DJD4 496 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 ANXA3P12429 323 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 AP2S1P53680 142 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-216ENST00000478603 KLF9Q13886 244 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-216ENST00000478603 RBMY1FQ15415 496 aaKnown RBP16.58■□□□□ 0.24
C9orf3-216ENST00000478603 OR51G1Q8NGK1 321 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 OR1S1Q8NH92 325 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 RAB40CQ96S21 281 aa16.58■□□□□ 0.24
C9orf3-216ENST00000478603 IGHV4-28A0A0C4DH34 117 aa16.57■□□□□ 0.24
C9orf3-216ENST00000478603 BUB3O43684 328 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms