RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 NXPH3O95157 252 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 NPPCP23582 126 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 YPEL3P61236 119 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-211ENST00000477612 RBMS2Q15434 407 aaKnown RBP16.11■□□□□ 0.17
COL9A3-211ENST00000477612 BAK1Q16611 211 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 WFDC3Q8IUB2 231 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 KIR2DL5AQ8N109 375 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 KIR2DL5BQ8NHK3 375 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 OVOL2Q9BRP0 275 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 TP53TG1Q9Y2A0 90 aa16.11■□□□□ 0.17
COL9A3-211ENST00000477612 A0A1W2PS18 150 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 NAP1L6A6NFF2 107 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 UBE2CO00762 179 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 SFT2D2O95562 160 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 RND2P52198 227 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 APOC4P55056 127 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 PAFAH1B2P68402 229 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 TIGITQ495A1 244 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 Q6ZWC4 215 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 SDHCQ99643 169 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-211ENST00000477612 TMEM231Q9H6L2 316 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 NDUFA13Q9P0J0 144 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 U3KQE9 123 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 SACSQ9NZJ4 4579 aa16.1■□□□□ 0.17
COL9A3-211ENST00000477612 DFFBO76075 338 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 IFNA10P01566 189 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 UBE2MP61081 183 aaKnown RBP16.09■□□□□ 0.17
COL9A3-211ENST00000477612 PPP1R1AQ13522 171 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 CENPSQ8N2Z9 138 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 METTL26Q96S19 204 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 TMED3Q9Y3Q3 217 aa16.09■□□□□ 0.17
COL9A3-211ENST00000477612 FAM90A26D6RGX4 464 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 VAMP1P23763 118 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 OR10J1P30954 320 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 OR1S1Q8NH92 325 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 IL17DQ8TAD2 202 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 Q8WTZ3 238 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 MS4A6AQ9H2W1 248 aa16.08■□□□□ 0.16
COL9A3-211ENST00000477612 IGKV3-7A0A075B6H7 116 aa16.07■□□□□ 0.16
COL9A3-211ENST00000477612 APRG1Q8IVJ8 170 aa16.07■□□□□ 0.16
COL9A3-211ENST00000477612 NPIPB3Q92617 1050 aa16.07■□□□□ 0.16
COL9A3-211ENST00000477612 MAP6D1Q9H9H5 199 aa16.07■□□□□ 0.16
COL9A3-211ENST00000477612 TENM2Q9NT68 2774 aa16.07■□□□□ 0.16
COL9A3-211ENST00000477612 IGHV3-66A0A0C4DH42 116 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 NDUFB6O95139 128 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 GPX4P36969 197 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-211ENST00000477612 TFPI2P48307 235 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 TRIQKQ629K1 86 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 ZFAND6Q6FIF0 208 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 GBGT1Q8N5D6 347 aa16.06■□□□□ 0.16
COL9A3-211ENST00000477612 TOMM40O96008 361 aa16.05■□□□□ 0.16
COL9A3-211ENST00000477612 INPP1P49441 399 aa16.05■□□□□ 0.16
COL9A3-211ENST00000477612 STPG3Q8N7X2 389 aa16.05■□□□□ 0.16
COL9A3-211ENST00000477612 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
COL9A3-211ENST00000477612 DNASE2O00115 360 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-211ENST00000477612 SPRY2O43597 315 aa16.04■□□□□ 0.16
COL9A3-211ENST00000477612 P2RY1P47900 373 aa16.04■□□□□ 0.16
COL9A3-211ENST00000477612 ZNF124Q15973 351 aa16.04■□□□□ 0.16
COL9A3-211ENST00000477612 RNF183Q96D59 192 aa16.04■□□□□ 0.16
COL9A3-211ENST00000477612 NARS2Q96I59 477 aaKnown RBP16.04■□□□□ 0.16
COL9A3-211ENST00000477612 C9orf170A2RU37 121 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 MED6O75586 246 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 IFNA4P05014 189 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 HNRNPCP07910 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL9A3-211ENST00000477612 BTCP35070 178 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 C16orf54Q6UWD8 224 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 RYR2Q92736 4967 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 AGRNO00468 2067 aa16.03■□□□□ 0.16
COL9A3-211ENST00000477612 K7EQG2 157 aa16.02■□□□□ 0.16
COL9A3-211ENST00000477612 RPL35AP18077 110 aaKnown RBP16.02■□□□□ 0.16
COL9A3-211ENST00000477612 RPL11P62913 178 aaKnown RBP16.02■□□□□ 0.16
COL9A3-211ENST00000477612 GAMTQ14353 236 aa16.02■□□□□ 0.16
COL9A3-211ENST00000477612 USF2Q15853 346 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-211ENST00000477612 ACY3Q96HD9 319 aa16.02■□□□□ 0.16
COL9A3-211ENST00000477612 GRAMD2BQ96HH9 432 aa16.02■□□□□ 0.16
COL9A3-211ENST00000477612 CSTL1Q9H114 145 aa16.02■□□□□ 0.16
COL9A3-211ENST00000477612 IL4P05112 153 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 HOXB5P09067 269 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 RD3LP0DJH9 198 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 PSG1P11464 419 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 IL7P13232 177 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 RAB11AP62491 216 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 DEFB135Q30KP9 77 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 GGNBP1Q5YKI7 109 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 FAM24BQ8N5W8 94 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 DCANP1Q8TF63 244 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 GLMPQ8WWB7 406 aa16.01■□□□□ 0.15
COL9A3-211ENST00000477612 CIB3Q96Q77 187 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-211ENST00000477612 IGKV1D-37A0A075B6S9 117 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 CENPXA8MT69 81 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 BUB3O43684 328 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 SYNGR2O43760 224 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 AP2S1P53680 142 aaPredicted RBP16■□□□□ 0.15
COL9A3-211ENST00000477612 DEFB131AP59861 70 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 CNPY1Q3B7I2 92 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 OR51G1Q8NGK1 321 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 FLVCR2Q9UPI3 526 aa16■□□□□ 0.15
COL9A3-211ENST00000477612 PLECQ15149 4684 aaKnown RBP15.99■□□□□ 0.15
COL9A3-211ENST00000477612 HELTA6NFD8 242 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 OR4E1P0C645 316 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms