RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 IGHV3OR16-13A0A075B7E8 117 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 IGHV3-74A0A0B4J1X5 117 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 CD5P06127 495 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 HOXB5P09067 269 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 SLC25A6P12236 298 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 TIGITQ495A1 244 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 NARS2Q96I59 477 aaKnown RBP12.07□□□□□ -0.48
COL1A1-205ENST00000476387 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 TMEM231Q9H6L2 316 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
COL1A1-205ENST00000476387 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 MED6O75586 246 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 IFNA4P05014 189 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 OR10J1P30954 320 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-205ENST00000476387 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 ST8SIA2Q92186 375 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 METTL26Q96S19 204 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
COL1A1-205ENST00000476387 IGKV3-7A0A075B6H7 116 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 LOC102724200A0A096LPH7 203 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-205ENST00000476387 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 PITX3O75364 302 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 IGKV1-17P01599 117 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 IGLC1P0CG04 106 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 NPPCP23582 126 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 PAFAH1B2P68402 229 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 FLVCR2Q9UPI3 526 aa12.05□□□□□ -0.48
COL1A1-205ENST00000476387 A0A1W2PS18 150 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 OR4E1P0C645 316 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 IAPPP10997 89 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 BTCP35070 178 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 TFPI2P48307 235 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 RAB11AP62491 216 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 DHRS2Q13268 280 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 CNPY1Q3B7I2 92 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 C4orf46Q504U0 113 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 Q8WTZ3 238 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 NPIPB3Q92617 1050 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 CIB3Q96Q77 187 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-205ENST00000476387 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
COL1A1-205ENST00000476387 PAIP2BQ9ULR5 123 aaKnown RBP12.04□□□□□ -0.48
COL1A1-205ENST00000476387 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 IFNA21P01568 189 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 YPEL3P61236 119 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-205ENST00000476387 RPL11P62913 178 aaKnown RBP12.03□□□□□ -0.48
COL1A1-205ENST00000476387 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
COL1A1-205ENST00000476387 LYG2Q86SG7 212 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 GBGT1Q8N5D6 347 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 SLC35E1Q96K37 410 aa12.03□□□□□ -0.48
COL1A1-205ENST00000476387 DNASE2O00115 360 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-205ENST00000476387 LYRM1O43325 122 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 SYNGR2O43760 224 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 JTBO76095 146 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 APOHP02749 345 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-205ENST00000476387 ANXA7P20073 488 aaKnown RBP12.02□□□□□ -0.49
COL1A1-205ENST00000476387 CMC4P56277 68 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-205ENST00000476387 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 CCDC32Q9BV29 185 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.49
COL1A1-205ENST00000476387 DNAH1Q9P2D7 4330 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 WRBO00258 174 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 ADAP1O75689 374 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 DFFBO76075 338 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 IL4P05112 153 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 CRYBB3P26998 211 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-205ENST00000476387 P2RY1P47900 373 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 APOC4P55056 127 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 LINC00299Q6ZSB3 139 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 C20orf85Q9H1P6 137 aa12.01□□□□□ -0.49
COL1A1-205ENST00000476387 ZFP92A6NM28 416 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 PLA2G10O15496 165 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 TOMM40O96008 361 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 HNRNPCP07910 306 aaKnown RBP eCLIP12□□□□□ -0.49
COL1A1-205ENST00000476387 RD3LP0DJH9 198 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 EIF2B2P49770 351 aaKnown RBP12□□□□□ -0.49
COL1A1-205ENST00000476387 WFDC3Q8IUB2 231 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 S100ZQ8WXG8 99 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 RABAC1Q9UI14 185 aa12□□□□□ -0.49
COL1A1-205ENST00000476387 TRAV2A0A0B4J234 112 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 FABP1P07148 127 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 GAMTQ14353 236 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 APRG1Q8IVJ8 170 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 LILRB2Q8N423 598 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 STXBP6Q8NFX7 210 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 MAP6D1Q9H9H5 199 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
COL1A1-205ENST00000476387 KIR2DL5BA0A0G2JN68 375 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms