RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 THYN1Q9P016 225 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 RCL1Q9Y2P8 373 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 LSM5Q9Y4Y9 91 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 HSPB11Q9Y547 144 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 TRAV3A0A0B4J244 114 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM213A2RRL7 107 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 RNF222A6NCQ9 220 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 A8MWP6 167 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 SYNGR2O43760 224 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 MED6O75586 246 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM50AO95807 157 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 OR2B8PP59922 312 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 SPCS3P61009 180 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 HSPE1P61604 102 aaKnown RBP8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 INO80EQ8NBZ0 244 aaPredicted RBP8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 OR4A16Q8NH70 328 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 CACNG8Q8WXS5 425 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 SMIM8Q96KF7 97 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 WFDC10AQ9H1F0 79 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM14BQ9NUH8 114 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 MLXQ9UH92 298 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 PRNDQ9UKY0 176 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 BOLA1Q9Y3E2 137 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 CSMD3Q7Z407 3707 aa8.31□□□□□ -1.08
SEMA4D-216ENST00000474258 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 IGLC7A0M8Q6 106 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 C15orf61A6NNL5 157 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 L7N2F9 121 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 CYB5BO43169 146 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 C8orf88P0DMB2 117 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 C4BPBP20851 252 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 TM4SF20Q53R12 229 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 ZNF502Q8TBZ5 544 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 MARC2Q969Z3 335 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 RBKSQ9H477 322 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 MRPL27Q9P0M9 148 aaKnown RBP8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 SELENOKQ9Y6D0 94 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 RYR2Q92736 4967 aa8.3□□□□□ -1.08
SEMA4D-216ENST00000474258 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 WRBO00258 174 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 SCAF4O95104 1147 aaKnown RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 RPL12P30050 165 aaKnown RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 S100A11P31949 105 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 GPR183P32249 361 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 NUP62P37198 522 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 ELLP55199 621 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 VAMP2P63027 116 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 OPCMLQ14982 345 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 RBPMS2Q6ZRY4 209 aaKnown RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 HSD17B13Q7Z5P4 300 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 OR2C3Q8N628 320 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 OR5B3Q8NH48 314 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 VN1R17PQ8TDU5 208 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 LYSTQ99698 3801 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 LYRM2Q9NU23 88 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 UFC1Q9Y3C8 167 aa8.29□□□□□ -1.08
SEMA4D-216ENST00000474258 LOC102724200A0A096LPH7 203 aaPredicted RBP8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 INS-IGF2F8WCM5 200 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 SSSCA1O60232 199 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 TSC22D2O75157 780 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 JTBO76095 146 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 SLC25A24Q6NUK1 477 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 BTNL8Q6UX41 500 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 UNQ9165/PRO28630Q6UXU0 137 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 OR10W1Q8NGF6 305 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 OR1L8Q8NGR8 309 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 SLC25A31Q9H0C2 315 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 OR51B2Q9Y5P1 312 aa8.28□□□□□ -1.08
SEMA4D-216ENST00000474258 IGHV3-35A0A0C4DH35 117 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 TAAR5O14804 337 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 TGOLN2O43493 480 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 BCL2L11O43521 198 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 NXPH3O95157 252 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 IFNA17P01571 189 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 PRCDQ00LT1 54 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 IFITM2Q01629 132 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 BAXQ07812 192 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 SPSB3Q6PJ21 355 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 TMEM14EPQ6UXP3 125 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 OR1L6Q8NGR2 347 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 GGTLC1Q9BX51 225 aa8.27□□□□□ -1.09
SEMA4D-216ENST00000474258 ARL6Q9H0F7 186 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms