RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 DPRXA6NFQ7 191 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 IGLV2-23P01705 113 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 C8orf88P0DMB2 117 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 PPOXP50336 477 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 DLX1P56177 255 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 TPPP2P59282 170 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 RPL8P62917 257 aaKnown RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 Q0VG73 95 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 MRPL54Q6P161 138 aaKnown RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 C19orf35Q6ZS72 473 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 BAGE3Q86Y29 109 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 BAGE2Q86Y30 109 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 Q8N976 141 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 OR4C5Q8NGB2 326 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 OR2D3Q8NGH3 330 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 VN1R17PQ8TDU5 208 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 ZFHX2Q9C0A1 2572 aaPredicted RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 POLEQ07864 2286 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 TRAV34A0A0B4J273 112 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 A0A1W2PRE2 83 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 TMEM238C9JI98 176 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 REG1AP05451 166 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 PRR31Q5SQ13 230 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 IBA57Q5T440 356 aaKnown RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 PNKDQ8N490 385 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 ZNF738Q8NE65 137 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 OR5AU1Q8NGC0 362 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 OSR1Q8TAX0 266 aaPredicted RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 FAM103A1Q9BTL3 118 aaKnown RBP8.83□□□□□ -1
C9orf3-214ENST00000473778 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 OSTCQ9NRP0 149 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 RPH3ALQ9UNE2 315 aa8.83□□□□□ -1
C9orf3-214ENST00000473778 SMIM27A0A1W2PRY6 76 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 M0QZ24 198 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 BMPR1BO00238 502 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 ISLRO14498 428 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 PLAUP00749 431 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 SELENOVP59797 346 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 UBE2L3P68036 154 aaKnown RBP8.82□□□□□ -1
C9orf3-214ENST00000473778 PRB3Q04118 309 aaPredicted RBP8.82□□□□□ -1
C9orf3-214ENST00000473778 TIGITQ495A1 244 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 NUP37Q8NFH4 326 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 ZNF714Q96N38 554 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 CSTL1Q9H114 145 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 ZNF355PQ9NSJ1 428 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 CTSZQ9UBR2 303 aa8.82□□□□□ -1
C9orf3-214ENST00000473778 A0A0G2JNJ9 132 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 C17orf100A8MU93 164 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 THBDP07204 575 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 TNFSF4P23510 183 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 PAFAH1B2P68402 229 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 SLAQ13239 276 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 TMEM177Q53S58 311 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 ZNF841Q6ZN19 808 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 WFDC8Q8IUA0 241 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 NPIPB3Q92617 1050 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 ST6GALNAC6Q969X2 333 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 FLYWCH2Q96CP2 140 aaKnown RBP8.81□□□□□ -1
C9orf3-214ENST00000473778 ZNF430Q9H8G1 570 aaPredicted RBP8.81□□□□□ -1
C9orf3-214ENST00000473778 Q9UFV3 132 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 LAMTOR2Q9Y2Q5 125 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 COX11Q9Y6N1 276 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 MALRD1Q5VYJ5 2156 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 GPX1P07203 203 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 RPL19P84098 196 aaKnown RBP8.81□□□□□ -1
C9orf3-214ENST00000473778 BSPH1Q075Z2 132 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 FBLN7Q53RD9 439 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 OR4B1Q8NGF8 309 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 CCL17Q92583 94 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 CDC42EP3Q9UKI2 254 aa8.81□□□□□ -1
C9orf3-214ENST00000473778 ASH1LQ9NR48 2969 aaKnown RBP8.81□□□□□ -1
C9orf3-214ENST00000473778 IGHV3-72A0A0B4J1Y9 119 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 A0A1W2PS18 150 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 VWC2LB2RUY7 222 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 APELAP0DMC3 54 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 SRIP30626 198 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TAS2R45P59539 299 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 GNG5P63218 68 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 FAM57AQ8TBR7 257 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 CACNG8Q8WXS5 425 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 H1FXQ92522 213 aaKnown RBP8.8□□□□□ -1
C9orf3-214ENST00000473778 NUDT11Q96G61 164 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 SGK494Q96LW2 274 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 C19orf24Q9BVV8 132 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 SERTAD4Q9NUC0 356 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TBL2Q9Y4P3 447 aaKnown RBP8.8□□□□□ -1
C9orf3-214ENST00000473778 TRBV9A0A0B4J1U6 114 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 IGHV2-70DA0A0C4DH43 119 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 A0A1W2PPI3 338 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 C22orf46C9J442 243 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TMEM178BH3BS89 294 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TNFRSF13BO14836 293 aaPredicted RBP8.8□□□□□ -1
C9orf3-214ENST00000473778 APOA2P02652 100 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms