RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CENPSQ8N2Z9 138 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 OR1S2Q8NGQ3 325 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 METTL26Q96S19 204 aa16.73■□□□□ 0.27
PTP4A1-203ENST00000473334 IGHV3-66A0A0C4DH42 116 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 SFT2D2O95562 160 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 IGLC1P0CG04 106 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 CMC4P56277 68 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 PPP1R1AQ13522 171 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 BAK1Q16611 211 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 ZFAND6Q6FIF0 208 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 GBGT1Q8N5D6 347 aa16.72■□□□□ 0.27
PTP4A1-203ENST00000473334 A0A1W2PS18 150 aa16.71■□□□□ 0.27
PTP4A1-203ENST00000473334 NAP1L6A6NFF2 107 aa16.71■□□□□ 0.27
PTP4A1-203ENST00000473334 DFFBO76075 338 aa16.71■□□□□ 0.27
PTP4A1-203ENST00000473334 OR10J1P30954 320 aa16.71■□□□□ 0.27
PTP4A1-203ENST00000473334 LILRB2Q8N423 598 aa16.71■□□□□ 0.27
PTP4A1-203ENST00000473334 CSMD3Q7Z407 3707 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 STARD9Q9P2P6 4700 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 PITX3O75364 302 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 SLC25A6P12236 298 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 CRYBB3P26998 211 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 ATP5IP56385 69 aaPredicted RBP16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 YPEL3P61236 119 aaPredicted RBP16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 APRG1Q8IVJ8 170 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 OVOL2Q9BRP0 275 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 NDUFA13Q9P0J0 144 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 TMED3Q9Y3Q3 217 aa16.7■□□□□ 0.26
PTP4A1-203ENST00000473334 KIR2DL5BA0A0G2JN68 375 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 KIR2DL5BA0A0G2JPC4 375 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 UBE2CO00762 179 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 KIR2DL5AQ8N109 375 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 KIR2DL5BQ8NHK3 375 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 Q8WTZ3 238 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 NPIPB3Q92617 1050 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 ACY3Q96HD9 319 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 NARS2Q96I59 477 aaKnown RBP16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 SDHCQ99643 169 aaPredicted RBP16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 MS4A6AQ9H2W1 248 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 MAP6D1Q9H9H5 199 aa16.69■□□□□ 0.26
PTP4A1-203ENST00000473334 DYNC2H1Q8NCM8 4307 aaKnown RBP16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 TRAV2A0A0B4J234 112 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 FAM90A26D6RGX4 464 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 DNASE2O00115 360 aaPredicted RBP16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 IFNA4P05014 189 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 RPL11P62913 178 aaKnown RBP16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 Q6ZWC4 215 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 WFDC3Q8IUB2 231 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 TP53TG1Q9Y2A0 90 aa16.68■□□□□ 0.26
PTP4A1-203ENST00000473334 NDUFB6O95139 128 aa16.67■□□□□ 0.26
PTP4A1-203ENST00000473334 RPL35AP18077 110 aaKnown RBP16.67■□□□□ 0.26
PTP4A1-203ENST00000473334 P2RY1P47900 373 aa16.67■□□□□ 0.26
PTP4A1-203ENST00000473334 STPG3Q8N7X2 389 aa16.67■□□□□ 0.26
PTP4A1-203ENST00000473334 IL17DQ8TAD2 202 aa16.67■□□□□ 0.26
PTP4A1-203ENST00000473334 ZNF124Q15973 351 aa16.66■□□□□ 0.26
PTP4A1-203ENST00000473334 GRAMD2BQ96HH9 432 aa16.66■□□□□ 0.26
PTP4A1-203ENST00000473334 LINC00854A0A1B0GVQ3 168 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 CENPXA8MT69 81 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 MED6O75586 246 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 TOMM40O96008 361 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 HNRNPCP07910 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 HOXB5P09067 269 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 IAPPP10997 89 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 DEFB135Q30KP9 77 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 C7orf50Q9BRJ6 194 aaKnown RBP16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 RABAC1Q9UI14 185 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 U3KQE9 123 aa16.65■□□□□ 0.26
PTP4A1-203ENST00000473334 C9orf170A2RU37 121 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 SPRY2O43597 315 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 IL4P05112 153 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 IL7P13232 177 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 GPX4P36969 197 aaPredicted RBP16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 GGNBP1Q5YKI7 109 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 SLC35E1Q96K37 410 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 FLVCR2Q9UPI3 526 aa16.64■□□□□ 0.25
PTP4A1-203ENST00000473334 RD3LP0DJH9 198 aa16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 RAB11AP62491 216 aa16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 USF2Q15853 346 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 FAM24BQ8N5W8 94 aa16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 STXBP6Q8NFX7 210 aa16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 CIB3Q96Q77 187 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-203ENST00000473334 K7EQG2 157 aa16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 BTCP35070 178 aa16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 EIF2B2P49770 351 aaKnown RBP16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 DEFB131AP59861 70 aa16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 GAMTQ14353 236 aa16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 RNF183Q96D59 192 aa16.62■□□□□ 0.25
PTP4A1-203ENST00000473334 SYNGR2O43760 224 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 OR4E1P0C645 316 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 PSG1P11464 419 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 DHRS2Q13268 280 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 C16orf54Q6UWD8 224 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 LYG2Q86SG7 212 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 COQ8AQ8NI60 647 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 GLMPQ8WWB7 406 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 MAGT1Q9H0U3 335 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 CSTL1Q9H114 145 aa16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
PTP4A1-203ENST00000473334 HELTA6NFD8 242 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 ZFP92A6NM28 416 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms