RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 UBR5O95071 2799 aaPredicted RBP6.04□□□□□ -1.44
COL6A3-208ENST00000468792 TRAV9-1A0A075B6T8 112 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 H7BYZ3 331 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 GGCTO75223 188 aaKnown RBP6.04□□□□□ -1.44
COL6A3-208ENST00000468792 HYPMO75409 117 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 EIF3GO75821 320 aaKnown RBP eCLIP6.04□□□□□ -1.44
COL6A3-208ENST00000468792 CNIH1O95406 144 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 HLA-DRB1P01911 266 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 TYMSP04818 313 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 IGLC1P0CG04 106 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 S100PP25815 95 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 TAS2R60P59551 318 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 UBE2G2P60604 165 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 ZNF90Q03938 601 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 FXYD3Q14802 87 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 ADIRFQ15847 76 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 ZNF674Q2M3X9 581 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 ZNF343Q6P1L6 599 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 FAM210BQ96KR6 192 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 OR5B12Q96R08 314 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 SLC25A2Q9BXI2 301 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 WNT10AQ9GZT5 417 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 THYN1Q9P016 225 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 MRPL36Q9P0J6 103 aaKnown RBP6.04□□□□□ -1.44
COL6A3-208ENST00000468792 TMEM14CQ9P0S9 112 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 RNF24Q9Y225 148 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 HILPDAQ9Y5L2 63 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 DMRT1Q9Y5R6 373 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 MYO18BQ8IUG5 2567 aa6.04□□□□□ -1.44
COL6A3-208ENST00000468792 IGLV11-55A0A075B6I3 123 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 K7EIM0 57 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 UBE2CO00762 179 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 PLXNB1O43157 2135 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 OR7C2O60412 319 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 REG1AP05451 166 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 S100A9P06702 114 aaKnown RBP6.03□□□□□ -1.44
COL6A3-208ENST00000468792 CXCL1P09341 107 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 OR10J4P0C629 311 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 HIST1H1BP16401 226 aaKnown RBP6.03□□□□□ -1.44
COL6A3-208ENST00000468792 GATA2P23769 480 aaPredicted RBP6.03□□□□□ -1.44
COL6A3-208ENST00000468792 GATA3P23771 443 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 MYCNOSP40205 109 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 YPEL3P61236 119 aaPredicted RBP6.03□□□□□ -1.44
COL6A3-208ENST00000468792 CX3CL1P78423 397 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 KLRD1Q13241 179 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 KCNIP4Q6PIL6 250 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 C16orf82Q7Z2V1 217 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 C2CD4CQ8TF44 421 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 FAM168AQ92567 244 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 ARPC1AQ92747 370 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 SMIM12Q96EX1 92 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 MISP3Q96FF7 219 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 ATP6V0BQ99437 205 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 CCL19Q99731 98 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 TXN2Q99757 166 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 PAXXQ9BUH6 204 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 OR51M1Q9H341 326 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 SRD5A3Q9H8P0 318 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 ZNF355PQ9NSJ1 428 aa6.03□□□□□ -1.44
COL6A3-208ENST00000468792 MRPL27Q9P0M9 148 aaKnown RBP6.03□□□□□ -1.44
COL6A3-208ENST00000468792 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
COL6A3-208ENST00000468792 TRBV20OR9-2A0A075B6H5 130 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 SCO2A0A1W2PP80 73 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 A0A1W2PRD5 423 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 A0A1W2PRF3 423 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 A0A1W2PRM7 423 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 HELTA6NFD8 242 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 PHOX2AO14813 284 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 NPFFO15130 113 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 SCGB2A1O75556 95 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 BRI3O95415 125 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 TOMM40O96008 361 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 AVPP01185 164 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 IGKV1-17P01599 117 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 S100A6P06703 90 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 TMEM11P17152 192 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 RPL35P42766 123 aaKnown RBP6.02□□□□□ -1.45
COL6A3-208ENST00000468792 RPS10P46783 165 aaKnown RBP6.02□□□□□ -1.45
COL6A3-208ENST00000468792 GALR1P47211 349 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 HES1Q14469 280 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 CLEC2AQ6UVW9 174 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 DYNAPQ8N1N2 210 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 Q8N9W7 124 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 OR5AU1Q8NGC0 362 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 VN1R17PQ8TDU5 208 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 FXYD5Q96DB9 178 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 SFRP2Q96HF1 295 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 FANCD2OSQ96PS1 177 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 MEGF9Q9H1U4 602 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 CDC42EP3Q9UKI2 254 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 ARHGAP32A7KAX9 2087 aa6.02□□□□□ -1.45
COL6A3-208ENST00000468792 TGIF2-C20orf24A0A0A6YYL0 155 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 IGHV7-81A0A0B4J1V7 117 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 CENPVL3A0A0U1RRI6 287 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 GGTLC3B5MD39 225 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 AP4M1O00189 453 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 S100A8P05109 93 aa6.01□□□□□ -1.45
COL6A3-208ENST00000468792 RD3LP0DJH9 198 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms