RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 GUCA2BQ16661 112 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 ANKRD55Q3KP44 614 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 LINC00299Q6ZSB3 139 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 TMED4Q7Z7H5 227 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 SMPXQ9UHP9 88 aa8.34□□□□□ -1.07
COL4A6-205ENST00000468338 CLN5O75503 358 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 NDUFB6O95139 128 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 SFT2D2O95562 160 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 SLC25A6P12236 298 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 BTCP35070 178 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 PPP1R1AQ13522 171 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 HAGHQ16775 308 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 TRIQKQ629K1 86 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 TOMM20LQ6UXN7 152 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 CENPSQ8N2Z9 138 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 SLC24A4Q8NFF2 622 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
COL4A6-205ENST00000468338 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 SPAG8Q99932 426 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-205ENST00000468338 C7orf50Q9BRJ6 194 aaKnown RBP8.33□□□□□ -1.08
COL4A6-205ENST00000468338 C20orf24Q9BUV8 137 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-205ENST00000468338 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 SELENOKQ9Y6D0 94 aa8.33□□□□□ -1.08
COL4A6-205ENST00000468338 IGHV3OR16-8A0A075B7F1 116 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 IGHV7-4-1A0A0J9YVY3 117 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 RBMY1BA6NDE4 496 aaKnown RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 RBMY1EA6NEQ0 496 aaKnown RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 OR11H12B2RN74 326 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 CHEK1O14757 476 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 SCAF4O95104 1147 aaKnown RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 IGKV1-17P01599 117 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 IL7P13232 177 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 OPRK1P41145 380 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 ATP5IP56385 69 aaPredicted RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 FAM90A2PQ658T7 463 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 PRSS54Q6PEW0 395 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 ZNF600Q6ZNG1 722 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 RBPMS2Q6ZRY4 209 aaKnown RBP8.32□□□□□ -1.08
COL4A6-205ENST00000468338 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 FAM110AQ9BQ89 295 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 TUBA4BQ9H853 241 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 SLC45A2Q9UMX9 530 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 TMED3Q9Y3Q3 217 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 U3KQ87 197 aa8.32□□□□□ -1.08
COL4A6-205ENST00000468338 TRAV14DV4A0A0A6YYC5 116 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 RPS10-NUDT3A0A1W2PQS6 291 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 FAM90A26D6RGX4 464 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 PLA2G10O15496 165 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 ZNF207O43670 478 aaKnown RBP8.31□□□□□ -1.08
COL4A6-205ENST00000468338 SLC25A4P12235 298 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 BTF3P20290 206 aaKnown RBP8.31□□□□□ -1.08
COL4A6-205ENST00000468338 NPY1RP25929 384 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 NOXA1Q86UR1 476 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 OR52B4Q8NGK2 314 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 DTD1Q8TEA8 209 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 RNF2Q99496 336 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 HIPK2Q9H2X6 1198 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 RBKSQ9H477 322 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 VSIRQ9H7M9 311 aa8.31□□□□□ -1.08
COL4A6-205ENST00000468338 PUS1Q9Y606 427 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL4A6-205ENST00000468338 TRAV30A0A087WSZ9 112 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 C9orf170A2RU37 121 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 YIF1AO95070 293 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 NXPH3O95157 252 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 IGLC1P0CG04 106 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 INPP1P49441 399 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 GINS3Q9BRX5 216 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
COL4A6-205ENST00000468338 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 CENPXA8MT69 81 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 CD5P06127 495 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 YPEL3P61236 119 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-205ENST00000468338 DHRS2Q13268 280 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 CNPY1Q3B7I2 92 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 ODF3L2Q3SX64 289 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 ETFRF1Q6IPR1 90 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 EDA2RQ9HAV5 297 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 FLVCR2Q9UPI3 526 aa8.29□□□□□ -1.08
COL4A6-205ENST00000468338 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 LOC102723971A0A1B0GUV8 181 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 LINC00854A0A1B0GVQ3 168 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 IFNA10P01566 189 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-205ENST00000468338 OR4E1P0C645 316 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 CRYBB3P26998 211 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-205ENST00000468338 RND2P52198 227 aa8.28□□□□□ -1.08
COL4A6-205ENST00000468338 TIGITQ495A1 244 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms