RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RND2P52198 227 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 GBGT1Q8N5D6 347 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 LRTM2Q8N967 370 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 OVOL2Q9BRP0 275 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 RBKSQ9H477 322 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 U3KQ87 197 aa12.67□□□□□ -0.38
SSBP1-207ENST00000468267 IGKV3-7A0A075B6H7 116 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 IGHV3-66A0A0C4DH42 116 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 DFFBO76075 338 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 IFNA10P01566 189 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 IGLC1P0CG04 106 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 CRYBB3P26998 211 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 APOC4P55056 127 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 ETFRF1Q6IPR1 90 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 METTL26Q96S19 204 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 TMEM231Q9H6L2 316 aa12.66□□□□□ -0.38
SSBP1-207ENST00000468267 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 A0A1W2PS18 150 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 UBE2CO00762 179 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 PITX3O75364 302 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 SFT2D2O95562 160 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 VAMP1P23763 118 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 OR10J1P30954 320 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-207ENST00000468267 YPEL3P61236 119 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-207ENST00000468267 BAK1Q16611 211 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 Q6ZWC4 215 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 KIR2DL5AQ8N109 375 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 KIR2DL5BQ8NHK3 375 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 MS4A6AQ9H2W1 248 aa12.65□□□□□ -0.38
SSBP1-207ENST00000468267 SLC25A6P12236 298 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
SSBP1-207ENST00000468267 PPP1R1AQ13522 171 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
SSBP1-207ENST00000468267 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 Q8WTZ3 238 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 NPIPB3Q92617 1050 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
SSBP1-207ENST00000468267 RYR2Q92736 4967 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 TRAV2A0A0B4J234 112 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 DNASE2O00115 360 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-207ENST00000468267 INPP1P49441 399 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
SSBP1-207ENST00000468267 RPL11P62913 178 aaKnown RBP12.63□□□□□ -0.39
SSBP1-207ENST00000468267 ZNF124Q15973 351 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 WFDC3Q8IUB2 231 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-207ENST00000468267 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 TMED3Q9Y3Q3 217 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 U3KQE9 123 aa12.63□□□□□ -0.39
SSBP1-207ENST00000468267 AGRNO00468 2067 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 FAM90A26D6RGX4 464 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 SPRY2O43597 315 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 IFNA4P05014 189 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 P2RY1P47900 373 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 NARS2Q96I59 477 aaKnown RBP12.62□□□□□ -0.39
SSBP1-207ENST00000468267 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
SSBP1-207ENST00000468267 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
SSBP1-207ENST00000468267 NDUFB6O95139 128 aa12.61□□□□□ -0.39
SSBP1-207ENST00000468267 GPX4P36969 197 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-207ENST00000468267 DEFB135Q30KP9 77 aa12.61□□□□□ -0.39
SSBP1-207ENST00000468267 RNF183Q96D59 192 aa12.61□□□□□ -0.39
SSBP1-207ENST00000468267 GRAMD2BQ96HH9 432 aa12.61□□□□□ -0.39
SSBP1-207ENST00000468267 TOMM40O96008 361 aa12.6□□□□□ -0.39
SSBP1-207ENST00000468267 HNRNPCP07910 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSBP1-207ENST00000468267 HOXB5P09067 269 aa12.6□□□□□ -0.39
SSBP1-207ENST00000468267 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
SSBP1-207ENST00000468267 CSTL1Q9H114 145 aa12.6□□□□□ -0.39
SSBP1-207ENST00000468267 RABAC1Q9UI14 185 aa12.6□□□□□ -0.39
SSBP1-207ENST00000468267 PLECQ15149 4684 aaKnown RBP12.59□□□□□ -0.39
SSBP1-207ENST00000468267 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 MED6O75586 246 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 IL4P05112 153 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 IAPPP10997 89 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 GAMTQ14353 236 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 GGNBP1Q5YKI7 109 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 FAM24BQ8N5W8 94 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 STXBP6Q8NFX7 210 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
SSBP1-207ENST00000468267 CENPXA8MT69 81 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 K7EQG2 157 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 PSG1P11464 419 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 BTCP35070 178 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 DEFB131AP59861 70 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 RAB11AP62491 216 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-207ENST00000468267 GLMPQ8WWB7 406 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms