RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CEBPZOSA8MTT3 80 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 CTDSP2O14595 271 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 GIG44P09565 113 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-206ENST00000466532 IGLC1P0CG04 106 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 SPP1P10451 314 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 SLC25A4P12235 298 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 EIF2B2P49770 351 aaKnown RBP13.94□□□□□ -0.18
COL9A3-206ENST00000466532 RND2P52198 227 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 C2orf83Q53S99 150 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 TMEM41BQ5BJD5 291 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 MORN3Q6PF18 240 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-206ENST00000466532 Q8NAQ8 132 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 SLC24A4Q8NFF2 622 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
COL9A3-206ENST00000466532 Q8WTZ3 238 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 SMIM4Q8WVI0 70 aa13.94□□□□□ -0.18
COL9A3-206ENST00000466532 CRYM-AS1A6NIL9 109 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL9A3-206ENST00000466532 AKAIN1P0CW23 69 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 C4BPBP20851 252 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 OR10J1P30954 320 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 DHRS2Q13268 280 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 OR4C16Q8NGL9 310 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 U3KQE9 123 aa13.93□□□□□ -0.18
COL9A3-206ENST00000466532 IGHV4-28A0A0C4DH34 117 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 HELTA6NFD8 242 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 NXPH3O95157 252 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 YPEL3P61236 119 aaPredicted RBP13.92□□□□□ -0.18
COL9A3-206ENST00000466532 IL18Q14116 193 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 SPCS2Q15005 226 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 ACTL10Q5JWF8 245 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 C16orf54Q6UWD8 224 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 GPR141Q7Z602 305 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 DNAH6Q9C0G6 4158 aa13.92□□□□□ -0.18
COL9A3-206ENST00000466532 RBMY1A1P0DJD3 496 aaKnown RBP13.91□□□□□ -0.18
COL9A3-206ENST00000466532 RBMY1CP0DJD4 496 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 MIFP14174 115 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 NPY1RP25929 384 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 TCTAP57738 103 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 RBMY1FQ15415 496 aaKnown RBP13.91□□□□□ -0.18
COL9A3-206ENST00000466532 ETFRF1Q6IPR1 90 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 TMEM170AQ8WVE7 144 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 GLMPQ8WWB7 406 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 PRRT1Q99946 306 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 MRPS26Q9BYN8 205 aaKnown RBP13.91□□□□□ -0.18
COL9A3-206ENST00000466532 HRH4Q9H3N8 390 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 TMEM56-RWDD3S4R434 201 aa13.91□□□□□ -0.18
COL9A3-206ENST00000466532 C11orf94C9JXX5 98 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 CTDSPLO15194 276 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 IL4P05112 153 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 AP2S1P53680 142 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-206ENST00000466532 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-206ENST00000466532 PSMG4Q5JS54 123 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 CLVS1Q8IUQ0 354 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-206ENST00000466532 OR51S1Q8NGJ8 323 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 DIRAS2Q96HU8 199 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 CLEC5AQ9NY25 188 aa13.9□□□□□ -0.18
COL9A3-206ENST00000466532 ZNF705EA8MWA4 302 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-206ENST00000466532 IGLL5B9A064 214 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 SULT1A3P0DMM9 295 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 SULT1A4P0DMN0 295 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 ALDH3B2P48448 385 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 NOXA1Q86UR1 476 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 NPIPB3Q92617 1050 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 IL22RA2Q969J5 263 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 ACY3Q96HD9 319 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 RAB40CQ96S21 281 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 X6R8D5 127 aa13.89□□□□□ -0.19
COL9A3-206ENST00000466532 TOMM40O96008 361 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 PRR20EP86478 221 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 PRR20CP86479 221 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 PRR20DP86480 221 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 PRR20BP86481 221 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 PRR20AP86496 221 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
COL9A3-206ENST00000466532 CACFD1Q9UGQ2 172 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 TBC1D24Q9ULP9 559 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
COL9A3-206ENST00000466532 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 IFNA10P01566 189 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 RD3LP0DJH9 198 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 HLA-DMBP28068 263 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 CSNK1G2-AS1Q8NCQ2 148 aa13.87□□□□□ -0.19
COL9A3-206ENST00000466532 ELOA3CA0A087WX78 387 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-206ENST00000466532 FAM90A26D6RGX4 464 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 BUB3O43684 328 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 GSTZ1O43708 216 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-206ENST00000466532 SNRPD3P62318 126 aaKnown RBP13.86□□□□□ -0.19
COL9A3-206ENST00000466532 SIGLEC15Q6ZMC9 328 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 Q6ZTC4 211 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 SCGB3A2Q96PL1 93 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 NRN1Q9NPD7 142 aa13.86□□□□□ -0.19
COL9A3-206ENST00000466532 CCDC59Q9P031 241 aaKnown RBP13.86□□□□□ -0.19
COL9A3-206ENST00000466532 SCP2D1Q9UJQ7 156 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 332.6 ms