RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 SUPT4H1P63272 117 aaKnown RBP10.52□□□□□ -0.73
CXCR4-203ENST00000466288 SSX9Q7RTT3 188 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 THAP6Q8TBB0 222 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 PRELID3BQ9Y3B1 194 aa10.52□□□□□ -0.73
CXCR4-203ENST00000466288 C5orf51A6NDU8 294 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 SIX6O95475 246 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 PPYP01298 95 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 IGLV2-14P01704 120 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 BRWD1-AS2P59051 145 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF546Q86UE3 836 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 Q8NAQ8 132 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 C2orf50Q96LR7 162 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 NAA60Q9H7X0 242 aa10.51□□□□□ -0.73
CXCR4-203ENST00000466288 FXYD6-FXYD2A0A087WZ82 144 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 DUXBA0A1W2PPF3 345 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 M0R2N4 97 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 PIGPP57054 158 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 RPL8P62917 257 aaKnown RBP10.5□□□□□ -0.73
CXCR4-203ENST00000466288 TMEM187Q14656 261 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 Q6ZTC4 211 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 TMUB2Q71RG4 321 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 PPP1R1CQ8WVI7 109 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 FXYD6Q9H0Q3 95 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 TNFSF18Q9UNG2 199 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 DNAH5Q8TE73 4624 aa10.5□□□□□ -0.73
CXCR4-203ENST00000466288 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 K7EMT4 169 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 MPC2O95563 127 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 CA1P00915 261 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RBMY1A1P0DJD3 496 aaKnown RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RBMY1CP0DJD4 496 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 CXCL2P19875 107 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 OR2B8PP59922 312 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 EIF4EBP1Q13541 118 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RBMY1FQ15415 496 aaKnown RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 PVRIGQ6DKI7 326 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 ACOT7LQ6ZUV0 252 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 SLC51BQ86UW2 128 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 CMTM1Q8IZ96 169 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 LGI3Q8N145 548 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 KCNRGQ8N5I3 272 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 INO80EQ8NBZ0 244 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RNF2Q99496 336 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 TRAV10A0A0B4J240 114 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 GPR31O00270 319 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 NDUFA4O00483 81 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 ARPC5O15511 151 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF207O43670 478 aaKnown RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 NUP62P37198 522 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 AP2S1P53680 142 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 CMC4P56277 68 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RAB14P61106 215 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 MSMO1Q15800 293 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 VN1R17PQ8TDU5 208 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 IL22RA2Q969J5 263 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 BSCL2Q96G97 398 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-203ENST00000466288 RNF126Q9BV68 326 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 THYN1Q9P016 225 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 TMED3Q9Y3Q3 217 aa10.49□□□□□ -0.73
CXCR4-203ENST00000466288 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 PI3P19957 117 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 TFPI2P48307 235 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 IL15RAQ13261 267 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 CLLU1Q5K131 121 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 CHRDL1Q9BU40 450 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 OR2W1Q9Y3N9 320 aa10.48□□□□□ -0.73
CXCR4-203ENST00000466288 IGKV1D-13A0A0B4J2D9 117 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 IGHV4-28A0A0C4DH34 117 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 C15orf61A6NNL5 157 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 TSC22D2O75157 780 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 RLN2P04090 185 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 P0DMU3 169 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 IGKV1-13P0DP09 117 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 TCTEX1D2Q8WW35 142 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 PHYHIPLQ96FC7 376 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 ZNF414Q96IQ9 312 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
CXCR4-203ENST00000466288 BET1LQ9NYM9 111 aa10.47□□□□□ -0.73
CXCR4-203ENST00000466288 LINC00862A6NCI5 91 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 F8W735 103 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms