RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ZNF705FA8MVS1 300 aaPredicted RBP1.82□□□□□ -2.12
GPNMB-205ENST00000463011 H3BRN7 92 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 C19orf84I3L1E1 186 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 J3QRE1 110 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 HTR1AP08908 422 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 METTL15P1P0C7V9 234 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 P0DMU3 169 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 FAM231AP0DMU4 169 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 FAM231CP0DMU5 169 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 NNATQ16517 81 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 LTC4SQ16873 150 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 TMEM78Q5T7P6 136 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 C10orf126Q8N4M7 172 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 GRPEL2Q8TAA5 225 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 TEX47Q8TBZ9 253 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 TXNDC17Q9BRA2 123 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 TTTY12Q9BZ98 90 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 ADAMTS7Q9UKP4 1686 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 KIF1BO60333 1816 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 RTEL1-TNFRSF6BF6WH68 1400 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 RIC1Q4ADV7 1423 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 UHRF1BP1Q6BDS2 1440 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 PXDNLA1KZ92 1463 aa1.82□□□□□ -2.12
GPNMB-205ENST00000463011 SCN10AQ9Y5Y9 1956 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 TRPM6Q9BX84 2022 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 IGKV1D-42A0A075B6H8 117 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 IGLV3-9A0A075B6K5 115 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 LY6LH3BQJ8 138 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 H3BQV1 296 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 TMEM256-PLSCR3K7ERE1 68 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 M0R378 163 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 NAPSAO96009 420 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 PMP2P02689 132 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 NFYBP25208 207 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 FKBP2P26885 142 aaKnown RBP1.81□□□□□ -2.12
GPNMB-205ENST00000463011 RNASE4P34096 147 aaKnown RBP1.81□□□□□ -2.12
GPNMB-205ENST00000463011 Q6ZQT0 140 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 DHFR2Q86XF0 187 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 OR8B3Q8NGG8 313 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 AQP3Q92482 292 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 PLEKHB2Q96CS7 222 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 HSPB9Q9BQS6 159 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 MED11Q9P086 117 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 EPDR1Q9UM22 224 aa1.81□□□□□ -2.12
GPNMB-205ENST00000463011 COL4A2P08572 1712 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 SDCBPO00560 298 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-205ENST00000463011 OR2T1O43869 369 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 COX6A1P12074 109 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 OGNP20774 298 aaKnown RBP1.8□□□□□ -2.12
GPNMB-205ENST00000463011 S100GP29377 79 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 INSL3P51460 131 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 UBE2BP63146 152 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 RHOGP84095 191 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 ZNF345Q14585 488 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 OR13D1Q8NGV5 346 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
GPNMB-205ENST00000463011 RMND5BQ96G75 393 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-205ENST00000463011 GPX7Q96SL4 187 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-205ENST00000463011 TRAV3A0A0B4J244 114 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 A0A1W2PRE2 83 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 IBA57-AS1B1ANH7 110 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 TSTD3H0UI37 97 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 PFDN1O60925 122 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 GGCTO75223 188 aaKnown RBP1.79□□□□□ -2.12
GPNMB-205ENST00000463011 C1QCP02747 245 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 TRGC2P03986 189 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 CTSDP07339 412 aaPredicted RBP1.79□□□□□ -2.12
GPNMB-205ENST00000463011 SOSTDC1Q6X4U4 206 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 DEFB128Q7Z7B8 93 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 OR2T10Q8NGZ9 312 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 CANT1Q8WVQ1 401 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 YPEL2Q96QA6 119 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 PRADC1Q9BSG0 188 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 MRPL32Q9BYC8 188 aaKnown RBP1.79□□□□□ -2.12
GPNMB-205ENST00000463011 CST9LQ9H4G1 147 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 C8orf4Q9NR00 106 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 OR52A1Q9UKL2 312 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 LTBP2Q14767 1821 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 ECM29Q5VYK3 1845 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 SCN9AQ15858 1988 aa1.79□□□□□ -2.12
GPNMB-205ENST00000463011 C7orf71A4D174 169 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 NDUFB3O43676 98 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 ZNF737O75373 536 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 IFNA14P01570 189 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 UBBP0CG47 229 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 DYNLT3P51808 116 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 BRMS1LQ5PSV4 323 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 FKBP1CQ5VVH2 108 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 SAMD13Q5VXD3 122 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 C22orf39Q6P5X5 142 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 CROCCP2Q86T23 111 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 PDZD9Q8IXQ8 264 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 IFT20Q8IY31 132 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 SLC30A7Q8NEW0 376 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 NUP35Q8NFH5 326 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 RNASE11Q8TAA1 199 aaKnown RBP1.78□□□□□ -2.12
GPNMB-205ENST00000463011 MBD3L1Q8WWY6 194 aa1.78□□□□□ -2.12
GPNMB-205ENST00000463011 TMEM126AQ9H061 195 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms