RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CLVS1Q8IUQ0 354 aaPredicted RBP16.67■□□□□ 0.26
PTPN4-207ENST00000460162 STHQ8IWL8 128 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 STXBP6Q8NFX7 210 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 OR1S2Q8NGQ3 325 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 DYNC2LI1Q8TCX1 351 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 IL22RA2Q969J5 263 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 GPR146Q96CH1 333 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 TMEM56-RWDD3S4R434 201 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 CEBPZOSA8MTT3 80 aa16.66■□□□□ 0.26
PTPN4-207ENST00000460162 K7EQG2 157 aa16.66■□□□□ 0.26
PTPN4-207ENST00000460162 EIF2B2P49770 351 aaKnown RBP16.66■□□□□ 0.26
PTPN4-207ENST00000460162 RND2P52198 227 aa16.66■□□□□ 0.26
PTPN4-207ENST00000460162 PRSS54Q6PEW0 395 aa16.66■□□□□ 0.26
PTPN4-207ENST00000460162 OR51S1Q8NGJ8 323 aa16.66■□□□□ 0.26
PTPN4-207ENST00000460162 ANKRD20A5PA0PJZ0 165 aa16.65■□□□□ 0.26
PTPN4-207ENST00000460162 GSTZ1O43708 216 aaPredicted RBP16.65■□□□□ 0.26
PTPN4-207ENST00000460162 TMBIM6P55061 237 aa16.65■□□□□ 0.26
PTPN4-207ENST00000460162 SCP2D1Q9UJQ7 156 aa16.65■□□□□ 0.26
PTPN4-207ENST00000460162 SULT1A3P0DMM9 295 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 SULT1A4P0DMN0 295 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 NPY1RP25929 384 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 OR10J1P30954 320 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 YPEL3P61236 119 aaPredicted RBP16.64■□□□□ 0.25
PTPN4-207ENST00000460162 TMEM41BQ5BJD5 291 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 ETFRF1Q6IPR1 90 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 TRPT1Q86TN4 253 aaKnown RBP16.64■□□□□ 0.25
PTPN4-207ENST00000460162 NOXA1Q86UR1 476 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 C11orf45Q8TAV5 145 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 DCANP1Q8TF63 244 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 SCGB3A2Q96PL1 93 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 RSL24D1Q9UHA3 163 aaKnown RBP16.64■□□□□ 0.25
PTPN4-207ENST00000460162 U3KQE9 123 aa16.64■□□□□ 0.25
PTPN4-207ENST00000460162 HELTA6NFD8 242 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 HNRNPCP07910 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTPN4-207ENST00000460162 SPP1P10451 314 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 NMSQ5H8A3 153 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 MORN3Q6PF18 240 aaPredicted RBP16.63■□□□□ 0.25
PTPN4-207ENST00000460162 Q8WTZ3 238 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 TMEM170AQ8WVE7 144 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 KCNIP3Q9Y2W7 256 aa16.63■□□□□ 0.25
PTPN4-207ENST00000460162 ZNF688P0C7X2 276 aa16.62■□□□□ 0.25
PTPN4-207ENST00000460162 RBMS2Q15434 407 aaKnown RBP16.62■□□□□ 0.25
PTPN4-207ENST00000460162 NXPH3O95157 252 aa16.61■□□□□ 0.25
PTPN4-207ENST00000460162 NANOS2P60321 138 aaKnown RBP16.61■□□□□ 0.25
PTPN4-207ENST00000460162 GLMPQ8WWB7 406 aa16.61■□□□□ 0.25
PTPN4-207ENST00000460162 AGRNO00468 2067 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 A0A0B4J2A0 478 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 NOL3O60936 208 aaKnown RBP16.6■□□□□ 0.25
PTPN4-207ENST00000460162 IL4P05112 153 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 CCR6P51684 374 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 AP2S1P53680 142 aaPredicted RBP16.6■□□□□ 0.25
PTPN4-207ENST00000460162 C16orf54Q6UWD8 224 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 SLIRPQ9GZT3 109 aaKnown RBP16.6■□□□□ 0.25
PTPN4-207ENST00000460162 MCUBQ9NWR8 336 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 HSPB7Q9UBY9 170 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 FBXL17Q9UF56 701 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 SHPKQ9UHJ6 478 aa16.6■□□□□ 0.25
PTPN4-207ENST00000460162 TOMM40O96008 361 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 IFNA4P05014 189 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 SRPXP78539 464 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 DHRS2Q13268 280 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 SMCO1Q147U7 214 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 USF2Q15853 346 aaPredicted RBP16.59■□□□□ 0.25
PTPN4-207ENST00000460162 LGALS9CQ6DKI2 356 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 Q8NAQ8 132 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 PRR13Q9NZ81 148 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 U3KQ87 197 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 KMT2AQ03164 3969 aa16.59■□□□□ 0.25
PTPN4-207ENST00000460162 PIGBOS1A0A0B4J2F0 54 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 IFNA10P01566 189 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 GIG44P09565 113 aaPredicted RBP16.58■□□□□ 0.24
PTPN4-207ENST00000460162 ANXA3P12429 323 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 C4BPBP20851 252 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 SUPT4H1P63272 117 aaKnown RBP16.58■□□□□ 0.24
PTPN4-207ENST00000460162 DTD1Q8TEA8 209 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 NPIPB3Q92617 1050 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 ACY3Q96HD9 319 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 HRH4Q9H3N8 390 aa16.58■□□□□ 0.24
PTPN4-207ENST00000460162 KNCNA6PVL3 124 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 H3BMQ9 156 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 DEFB4AO15263 64 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 ACTL10Q5JWF8 245 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 LGI3Q8N145 548 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 SOSTQ9BQB4 213 aa16.57■□□□□ 0.24
PTPN4-207ENST00000460162 FABP12A6NFH5 140 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 ZNF705EA8MWA4 302 aaPredicted RBP16.56■□□□□ 0.24
PTPN4-207ENST00000460162 RD3LP0DJH9 198 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 MIFP14174 115 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 AKR1C4P17516 323 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 TNFSF8P32971 234 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 FAUP35544 74 aaKnown RBP16.56■□□□□ 0.24
PTPN4-207ENST00000460162 NUP62P37198 522 aaPredicted RBP16.56■□□□□ 0.24
PTPN4-207ENST00000460162 TCTAP57738 103 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 PSMG4Q5JS54 123 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 LYZL2Q7Z4W2 148 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 SEPSECSQ9HD40 501 aaKnown RBP16.56■□□□□ 0.24
PTPN4-207ENST00000460162 NRN1Q9NPD7 142 aa16.56■□□□□ 0.24
PTPN4-207ENST00000460162 BUB3O43684 328 aa16.55■□□□□ 0.24
PTPN4-207ENST00000460162 ATP5IP56385 69 aaPredicted RBP16.55■□□□□ 0.24
PTPN4-207ENST00000460162 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms