RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 TMEM56-RWDD3S4R434 201 aa9.09□□□□□ -0.95
SMCR2-201ENST00000456090 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
SMCR2-201ENST00000456090 DNAH10Q8IVF4 4471 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 ANKRD20A5PA0PJZ0 165 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 GSTZ1O43708 216 aaPredicted RBP9.08□□□□□ -0.96
SMCR2-201ENST00000456090 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 OR10J1P30954 320 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 P2RY1P47900 373 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 RND2P52198 227 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 STHQ8IWL8 128 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 RNASEH2CQ8TDP1 164 aaKnown RBP9.08□□□□□ -0.96
SMCR2-201ENST00000456090 NARS2Q96I59 477 aaKnown RBP9.08□□□□□ -0.96
SMCR2-201ENST00000456090 BCL7BQ9BQE9 202 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 MCUBQ9NWR8 336 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 SCP2D1Q9UJQ7 156 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 KCNIP3Q9Y2W7 256 aa9.08□□□□□ -0.96
SMCR2-201ENST00000456090 K7EQG2 157 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 NOL3O60936 208 aaKnown RBP9.07□□□□□ -0.96
SMCR2-201ENST00000456090 SULT1A3P0DMM9 295 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 SULT1A4P0DMN0 295 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 SLC25A4P12235 298 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 TMEM187Q14656 261 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 RBMS2Q15434 407 aaKnown RBP9.07□□□□□ -0.96
SMCR2-201ENST00000456090 Q8WTZ3 238 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 PHLDA1Q8WV24 401 aaPredicted RBP9.07□□□□□ -0.96
SMCR2-201ENST00000456090 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 IL22RA2Q969J5 263 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 SLIRPQ9GZT3 109 aaKnown RBP9.07□□□□□ -0.96
SMCR2-201ENST00000456090 NDUFA13Q9P0J0 144 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 RSL24D1Q9UHA3 163 aaKnown RBP9.07□□□□□ -0.96
SMCR2-201ENST00000456090 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
SMCR2-201ENST00000456090 FABP12A6NFH5 140 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 H3BMQ9 156 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 AKR1C4P17516 323 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 NPY1RP25929 384 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 NANOS2P60321 138 aaKnown RBP9.06□□□□□ -0.96
SMCR2-201ENST00000456090 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
SMCR2-201ENST00000456090 NMSQ5H8A3 153 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 C11orf45Q8TAV5 145 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 SCGB3A2Q96PL1 93 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
SMCR2-201ENST00000456090 CACFD1Q9UGQ2 172 aa9.06□□□□□ -0.96
SMCR2-201ENST00000456090 A0A0B4J2A0 478 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 DEFB4AO15263 64 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 IFNA10P01566 189 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 IL4P05112 153 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 HNRNPCP07910 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMCR2-201ENST00000456090 TNFSF8P32971 234 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 EIF2B2P49770 351 aaKnown RBP9.05□□□□□ -0.96
SMCR2-201ENST00000456090 CCR6P51684 374 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
SMCR2-201ENST00000456090 LYZL2Q7Z4W2 148 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 NOXA1Q86UR1 476 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 MCFD2Q8NI22 146 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 SOSTQ9BQB4 213 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 FBXL17Q9UF56 701 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 SHPKQ9UHJ6 478 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 U3KQE9 123 aa9.05□□□□□ -0.96
SMCR2-201ENST00000456090 HELTA6NFD8 242 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 ANXA3P12429 323 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 DHRS2Q13268 280 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 SMCO1Q147U7 214 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
SMCR2-201ENST00000456090 C16orf54Q6UWD8 224 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 TRPT1Q86TN4 253 aaKnown RBP9.04□□□□□ -0.96
SMCR2-201ENST00000456090 LGI3Q8N145 548 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 DTD1Q8TEA8 209 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 RBM38Q9H0Z9 239 aaKnown RBP9.04□□□□□ -0.96
SMCR2-201ENST00000456090 RBKSQ9H477 322 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 U3KQ87 197 aa9.04□□□□□ -0.96
SMCR2-201ENST00000456090 GIG44P09565 113 aaPredicted RBP9.03□□□□□ -0.96
SMCR2-201ENST00000456090 RD3LP0DJH9 198 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 C4BPBP20851 252 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 AP2S1P53680 142 aaPredicted RBP9.03□□□□□ -0.96
SMCR2-201ENST00000456090 SRPXP78539 464 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 CNPY1Q3B7I2 92 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
SMCR2-201ENST00000456090 TOMM40O96008 361 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 IFNA4P05014 189 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 SPP1P10451 314 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 PSG1P11464 419 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
SMCR2-201ENST00000456090 KLF9Q13886 244 aaPredicted RBP9.02□□□□□ -0.97
SMCR2-201ENST00000456090 PYDC2Q56P42 97 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 TMEM41BQ5BJD5 291 aa9.02□□□□□ -0.97
SMCR2-201ENST00000456090 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms