RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SPCS3P61009 180 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
GPC1-206ENST00000455111 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 C16orf54Q6UWD8 224 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 ZFAND1Q8TCF1 268 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 GRAMD2BQ96HH9 432 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 CRYM-AS1A6NIL9 109 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 RND2P52198 227 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 SUB1P53999 127 aaKnown RBP eCLIP11.59□□□□□ -0.55
GPC1-206ENST00000455111 STHQ8IWL8 128 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 CCDC71LQ8N9Z2 235 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 METTL26Q96S19 204 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 CELA1Q9UNI1 258 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 PKD1P98161 4303 aa11.59□□□□□ -0.55
GPC1-206ENST00000455111 DEFB1P60022 68 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 DHODHQ02127 395 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 Q6ZTC4 211 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 SMIM4Q8WVI0 70 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 AP3S1Q92572 193 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 RBPMSQ93062 196 aaKnown RBP11.58□□□□□ -0.56
GPC1-206ENST00000455111 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
GPC1-206ENST00000455111 PDCD10Q9BUL8 212 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.58□□□□□ -0.56
GPC1-206ENST00000455111 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.56
GPC1-206ENST00000455111 HTR2BP41595 481 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
GPC1-206ENST00000455111 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 TMEM268Q5VZI3 342 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 FAM219AQ8IW50 185 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 SLC24A4Q8NFF2 622 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 C2CD4CQ8TF44 421 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 MFFQ9GZY8 342 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
GPC1-206ENST00000455111 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 A0A1W2PS18 150 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 ATG12O94817 140 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 HNRNPCP07910 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
GPC1-206ENST00000455111 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
GPC1-206ENST00000455111 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 ZNF767PQ75MW2 155 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 OR1S2Q8NGQ3 325 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 TMEM231Q9H6L2 316 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
GPC1-206ENST00000455111 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
GPC1-206ENST00000455111 IGLL5B9A064 214 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 BUB3O43684 328 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 B3GALNT1O75752 331 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 SPP1P10451 314 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 OR10J1P30954 320 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
GPC1-206ENST00000455111 DHRS2Q13268 280 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 SURF2Q15527 256 aaPredicted RBP11.55□□□□□ -0.56
GPC1-206ENST00000455111 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 OR51S1Q8NGJ8 323 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 RNASE11Q8TAA1 199 aaKnown RBP11.55□□□□□ -0.56
GPC1-206ENST00000455111 DYNC2LI1Q8TCX1 351 aa11.55□□□□□ -0.56
GPC1-206ENST00000455111 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
GPC1-206ENST00000455111 TRAV30A0A087WSZ9 112 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 ANKRD20A5PA0PJZ0 165 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 CTDSPLO15194 276 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 IFNA4P05014 189 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 IL4P05112 153 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 MIFP14174 115 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
GPC1-206ENST00000455111 SOSTQ9BQB4 213 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 C14orf166Q9Y224 244 aaKnown RBP11.54□□□□□ -0.56
GPC1-206ENST00000455111 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
GPC1-206ENST00000455111 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 CEBPZOSA8MTT3 80 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 H3BMM0 161 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 RGS5O15539 181 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 TOMM40O96008 361 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 PSG1P11464 419 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 SLC25A4P12235 298 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 NPY1RP25929 384 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 Q8WTZ3 238 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 RBKSQ9H477 322 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
GPC1-206ENST00000455111 RPS10-NUDT3A0A1W2PQS6 291 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 HELTA6NFD8 242 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 DISC1C4P0D8 188 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 MRPS10P82664 201 aaKnown RBP11.52□□□□□ -0.57
GPC1-206ENST00000455111 OR51G1Q8NGK1 321 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 C15orf40Q8WUR7 153 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 ACY3Q96HD9 319 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
GPC1-206ENST00000455111 TBC1D24Q9ULP9 559 aa11.52□□□□□ -0.57
GPC1-206ENST00000455111 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms