RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 TMEM230Q96A57 120 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 RNF183Q96D59 192 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 METTL26Q96S19 204 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
CHD3-206ENST00000452447 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 CACFD1Q9UGQ2 172 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 AGRNO00468 2067 aa9.53□□□□□ -0.88
CHD3-206ENST00000452447 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 A0A1B0GU03 582 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 TNFRSF9Q07011 255 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 ZNF79Q15937 498 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 ZNF124Q15973 351 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 LILRB2Q8N423 598 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 NARS2Q96I59 477 aaKnown RBP9.52□□□□□ -0.89
CHD3-206ENST00000452447 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 MRPL36Q9P0J6 103 aaKnown RBP9.52□□□□□ -0.89
CHD3-206ENST00000452447 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
CHD3-206ENST00000452447 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
CHD3-206ENST00000452447 TMEM217Q8N7C4 229 aa9.51□□□□□ -0.89
CHD3-206ENST00000452447 SLC24A4Q8NFF2 622 aa9.51□□□□□ -0.89
CHD3-206ENST00000452447 IL22RA2Q969J5 263 aa9.51□□□□□ -0.89
CHD3-206ENST00000452447 C7orf50Q9BRJ6 194 aaKnown RBP9.51□□□□□ -0.89
CHD3-206ENST00000452447 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 UPK1BO75841 260 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 NXPH3O95157 252 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD3-206ENST00000452447 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 SLC25A4P12235 298 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 AKR1C4P17516 323 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 TIGITQ495A1 244 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 C2orf83Q53S99 150 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 ETFRF1Q6IPR1 90 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 NOXA1Q86UR1 476 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
CHD3-206ENST00000452447 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 EPPK1P58107 5090 aaKnown RBP9.5□□□□□ -0.89
CHD3-206ENST00000452447 TRAV2A0A0B4J234 112 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 ANXA3P12429 323 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 IL7P13232 177 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 DEFB131AP59861 70 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 TMEM187Q14656 261 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 Q8WTZ3 238 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 GRAMD2BQ96HH9 432 aa9.5□□□□□ -0.89
CHD3-206ENST00000452447 A0A0B4J2A0 478 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 NPY1RP25929 384 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 CRYBB3P26998 211 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 P2RY1P47900 373 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 EIF2B2P49770 351 aaKnown RBP9.49□□□□□ -0.89
CHD3-206ENST00000452447 RND2P52198 227 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 PRSS54Q6PEW0 395 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 OR1S2Q8NGQ3 325 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 RARRES2Q99969 163 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 PRR13Q9NZ81 148 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 SHPKQ9UHJ6 478 aa9.49□□□□□ -0.89
CHD3-206ENST00000452447 PIGBOS1A0A0B4J2F0 54 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 IFNA10P01566 189 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 ATF4P18848 351 aaPredicted RBP9.48□□□□□ -0.89
CHD3-206ENST00000452447 OR10J1P30954 320 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 CCR6P51684 374 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 SRPXP78539 464 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 EWSR1Q01844 656 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHD3-206ENST00000452447 NMSQ5H8A3 153 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 U3KQ87 197 aa9.48□□□□□ -0.89
CHD3-206ENST00000452447 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
CHD3-206ENST00000452447 YPEL3P61236 119 aaPredicted RBP9.47□□□□□ -0.89
CHD3-206ENST00000452447 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 STHQ8IWL8 128 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 LGI3Q8N145 548 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 TRIM63Q969Q1 353 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
CHD3-206ENST00000452447 HELTA6NFD8 242 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 AP2S1P53680 142 aaPredicted RBP9.46□□□□□ -0.89
CHD3-206ENST00000452447 SUPT4H1P63272 117 aaKnown RBP9.46□□□□□ -0.89
CHD3-206ENST00000452447 RBMS2Q15434 407 aaKnown RBP9.46□□□□□ -0.89
CHD3-206ENST00000452447 BAK1Q16611 211 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 CEMP1Q6PRD7 247 aaPredicted RBP9.46□□□□□ -0.89
CHD3-206ENST00000452447 Q6ZNX1 250 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 TMED4Q7Z7H5 227 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 OR11H2Q8NH07 326 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 DTD1Q8TEA8 209 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 TMEM170AQ8WVE7 144 aa9.46□□□□□ -0.89
CHD3-206ENST00000452447 ACY3Q96HD9 319 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms