RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 ACSM6Q6P461 480 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 OR1S2Q8NGQ3 325 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 LYPD6BQ8NI32 183 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 HEYLQ9NQ87 328 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 GAR1Q9NY12 217 aaKnown RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 PRR13Q9NZ81 148 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 PEMTQ9UBM1 199 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 CACNG5Q9UF02 275 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 F8W036 122 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 DNASE2O00115 360 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-203ENST00000452013 CORTO00230 105 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 WIPF1O43516 503 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 SAP30O75446 220 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 ADAP1O75689 374 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 OR2C1O95371 312 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 SLC25A6P12236 298 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 ARL3P36405 182 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 MFAP4P55083 255 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 SYNJ2BPP57105 145 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 S100A10P60903 97 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 ZNF266Q14584 549 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 PDLIM3Q53GG5 364 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-203ENST00000452013 SPINK9Q5DT21 86 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 FAM74A1Q5RGS3 127 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 PXDC1Q5TGL8 231 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 GGNBP1Q5YKI7 109 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 GPHB5Q86YW7 130 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 ZNF502Q8TBZ5 544 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 NARS2Q96I59 477 aaKnown RBP6.81□□□□□ -1.32
COL8A1-203ENST00000452013 OR10C1Q96KK4 312 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 TXN2Q99757 166 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 SLC25A31Q9H0C2 315 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 DMRT1Q9Y5R6 373 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 S4R3C0 116 aa6.81□□□□□ -1.32
COL8A1-203ENST00000452013 FBN3Q75N90 2809 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 PPP5D1E7EU14 171 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 BMPR1BO00238 502 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 HOXB5P09067 269 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 MFAP2P55001 183 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 ATP5IP56385 69 aaPredicted RBP6.8□□□□□ -1.32
COL8A1-203ENST00000452013 BAXQ07812 192 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 PEA15Q15121 130 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 GUCA2BQ16661 112 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 SMUG1Q53HV7 270 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 Q56UQ5 140 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 SPSB3Q6PJ21 355 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.8□□□□□ -1.32
COL8A1-203ENST00000452013 TMED6Q8WW62 240 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 BSCL2Q96G97 398 aaPredicted RBP6.8□□□□□ -1.32
COL8A1-203ENST00000452013 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 GINS3Q9BRX5 216 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 PBDC1Q9BVG4 233 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 OR5AC2Q9NZP5 309 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 GSKIPQ9P0R6 139 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 PRELID1Q9Y255 219 aa6.8□□□□□ -1.32
COL8A1-203ENST00000452013 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 ZNF320A2RRD8 509 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 FAM90A26D6RGX4 464 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 I3L2K1 104 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 K7EIM0 57 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 LGALS9O00182 355 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 TGOLN2O43493 480 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 MED6O75586 246 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 LY86O95711 162 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 MT-CO2P00403 227 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
COL8A1-203ENST00000452013 CD5P06127 495 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
COL8A1-203ENST00000452013 FCGR2BP31994 310 aaPredicted RBP6.79□□□□□ -1.32
COL8A1-203ENST00000452013 GPR183P32249 361 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 NPBWR1P48145 328 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 TNFRSF9Q07011 255 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 C2orf83Q53S99 150 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 PVRIGQ6DKI7 326 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 BTNL8Q6UX41 500 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 DPPA3Q6W0C5 159 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 PINX1Q96BK5 328 aaKnown RBP6.79□□□□□ -1.32
COL8A1-203ENST00000452013 TUBA4BQ9H853 241 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 TREM1Q9NP99 234 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 AURKAIP1Q9NWT8 199 aaPredicted RBP6.79□□□□□ -1.32
COL8A1-203ENST00000452013 SIGLEC8Q9NYZ4 499 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 HSPB7Q9UBY9 170 aa6.79□□□□□ -1.32
COL8A1-203ENST00000452013 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
COL8A1-203ENST00000452013 NUPL2O15504 423 aaKnown RBP6.78□□□□□ -1.32
COL8A1-203ENST00000452013 PITX3O75364 302 aa6.78□□□□□ -1.32
COL8A1-203ENST00000452013 SCGB2A1O75556 95 aa6.78□□□□□ -1.32
COL8A1-203ENST00000452013 IFNA10P01566 189 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms