RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 HSPB7Q9UBY9 170 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
SGCE-208ENST00000450385 AKR1C4P17516 323 aa11.86□□□□□ -0.51
SGCE-208ENST00000450385 KLF9Q13886 244 aaPredicted RBP11.86□□□□□ -0.51
SGCE-208ENST00000450385 PYDC2Q56P42 97 aa11.86□□□□□ -0.51
SGCE-208ENST00000450385 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
SGCE-208ENST00000450385 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
SGCE-208ENST00000450385 JTBO76095 146 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 NPY1RP25929 384 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 GPX4P36969 197 aaPredicted RBP11.85□□□□□ -0.51
SGCE-208ENST00000450385 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
SGCE-208ENST00000450385 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 SPANXN2Q5MJ10 180 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 TRIM63Q969Q1 353 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 MS4A6AQ9H2W1 248 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 SEPSECSQ9HD40 501 aaKnown RBP11.85□□□□□ -0.51
SGCE-208ENST00000450385 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
SGCE-208ENST00000450385 HELTA6NFD8 242 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 FAM90A26D6RGX4 464 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 IGLC1P0CG04 106 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 OR10J1P30954 320 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 NUP62P37198 522 aaPredicted RBP11.84□□□□□ -0.51
SGCE-208ENST00000450385 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
SGCE-208ENST00000450385 MLANAQ16655 118 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 CCDC190Q86UF4 302 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 DTD1Q8TEA8 209 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 U3KQE9 123 aa11.84□□□□□ -0.51
SGCE-208ENST00000450385 IGHV3-49A0A0A0MS15 119 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 CCDC160A6NGH7 325 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 IFNA10P01566 189 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 RPL11P62913 178 aaKnown RBP11.83□□□□□ -0.52
SGCE-208ENST00000450385 LYZL2Q7Z4W2 148 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 V9GYH0 126 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 SACSQ9NZJ4 4579 aa11.83□□□□□ -0.52
SGCE-208ENST00000450385 MED6O75586 246 aa11.82□□□□□ -0.52
SGCE-208ENST00000450385 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
SGCE-208ENST00000450385 RND2P52198 227 aa11.82□□□□□ -0.52
SGCE-208ENST00000450385 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
SGCE-208ENST00000450385 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
SGCE-208ENST00000450385 RBM38Q9H0Z9 239 aaKnown RBP11.82□□□□□ -0.52
SGCE-208ENST00000450385 MRPL36Q9P0J6 103 aaKnown RBP11.82□□□□□ -0.52
SGCE-208ENST00000450385 NAP1L6A6NFF2 107 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 PITX3O75364 302 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 TOMM40O96008 361 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 FABP1P07148 127 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 HNRNPCP07910 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
SGCE-208ENST00000450385 RD3LP0DJH9 198 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 P2RY1P47900 373 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 TFPI2P48307 235 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 RAB11AP62491 216 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 RPP30P78346 268 aaKnown RBP11.81□□□□□ -0.52
SGCE-208ENST00000450385 ZNF79Q15937 498 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 TIGITQ495A1 244 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 LYG2Q86SG7 212 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 LILRB2Q8N423 598 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 GBGT1Q8N5D6 347 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 OR1S1Q8NH92 325 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
SGCE-208ENST00000450385 CIB3Q96Q77 187 aaPredicted RBP11.81□□□□□ -0.52
SGCE-208ENST00000450385 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 IGHV3OR16-13A0A075B7E8 117 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 IGHV3-74A0A0B4J1X5 117 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 NUPR2A6NF83 97 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 K7EQG2 157 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 RPL35AP18077 110 aaKnown RBP11.8□□□□□ -0.52
SGCE-208ENST00000450385 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
SGCE-208ENST00000450385 CNPY1Q3B7I2 92 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 C16orf54Q6UWD8 224 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 STHQ8IWL8 128 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 TMEM170AQ8WVE7 144 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 RBKSQ9H477 322 aa11.8□□□□□ -0.52
SGCE-208ENST00000450385 CFDP00746 253 aaPredicted RBP11.79□□□□□ -0.52
SGCE-208ENST00000450385 IFNA4P05014 189 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 DEFB131AP59861 70 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 MORN3Q6PF18 240 aaPredicted RBP11.79□□□□□ -0.52
SGCE-208ENST00000450385 TMED4Q7Z7H5 227 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 RABAC1Q9UI14 185 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
SGCE-208ENST00000450385 A0A0J9YWU9 116 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 SFT2D2O95562 160 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 SPP1P10451 314 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 VAMP1P23763 118 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 OR8G2PQ6IF36 304 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 RARRES2Q99969 163 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 NDUFA13Q9P0J0 144 aa11.78□□□□□ -0.52
SGCE-208ENST00000450385 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
SGCE-208ENST00000450385 CENPXA8MT69 81 aa11.77□□□□□ -0.53
SGCE-208ENST00000450385 BUB3O43684 328 aa11.77□□□□□ -0.53
SGCE-208ENST00000450385 IL4P05112 153 aa11.77□□□□□ -0.53
SGCE-208ENST00000450385 S100A7P31151 101 aa11.77□□□□□ -0.53
SGCE-208ENST00000450385 INPP1P49441 399 aa11.77□□□□□ -0.53
SGCE-208ENST00000450385 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms