RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RAB11AP62491 216 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 BAXQ07812 192 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 IL34Q6ZMJ4 242 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 THYN1Q9P016 225 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 STRAPQ9Y3F4 350 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 F11RQ9Y624 299 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 IGHV4OR15-8A0A075B7B6 117 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 A0A087WW49 117 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 CORTO00230 105 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 SCAF4O95104 1147 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 NPY1RP25929 384 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 SULT1A2P50226 295 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 RAB5CP51148 216 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 TPPP2P59282 170 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 EWSR1Q01844 656 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 SLC25A24Q6NUK1 477 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-204ENST00000450303 TRGV3P03979 118 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 RNASE2P10153 161 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 STX12Q86Y82 276 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 DLX4Q92988 240 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 ARV1Q9H2C2 271 aa13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-204ENST00000450303 LINC01619G3V211 115 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 OVOL1O14753 267 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 BRI3O95415 125 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 IFNA4P05014 189 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 CD69Q07108 199 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 BSXQ3C1V8 233 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
PRPF40A-204ENST00000450303 FAM24AA6NFZ4 105 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 H3BP45 60 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 DFFBO76075 338 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 PAX9P55771 341 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 DEFA5Q01523 94 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
PRPF40A-204ENST00000450303 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 GNPNAT1Q96EK6 184 aaPredicted RBP13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 MISP3Q96FF7 219 aa13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 NARS2Q96I59 477 aaKnown RBP13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 B9D2Q9BPU9 175 aa13.09□□□□□ -0.31
PRPF40A-204ENST00000450303 COL7A1Q02388 2944 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 IGSF23A1L1A6 192 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 SAP30O75446 220 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 TMEM50AO95807 157 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 IFNA5P01569 189 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 HSPB1P04792 205 aaKnown RBP13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 M6PRP20645 277 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 TMEM14EPQ6UXP3 125 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 OR10P1Q8NGE3 313 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 USMG5Q96IX5 58 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 OR4C12Q96R67 309 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 LSM4Q9Y4Z0 139 aaKnown RBP13.08□□□□□ -0.32
PRPF40A-204ENST00000450303 DNAH9Q9NYC9 4486 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 OR2J3O76001 311 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 PRH1P02810 166 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 METTL15P1P0C7V9 234 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 SPP1P10451 314 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 OPRK1P41145 380 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 CAMLGP49069 296 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 RHOGP84095 191 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 NHLH2Q02577 135 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 PXDC1Q5TGL8 231 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 SUN5Q8TC36 379 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 PINX1Q96BK5 328 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 SORL1Q92673 2214 aa13.07□□□□□ -0.32
PRPF40A-204ENST00000450303 SULT1A1P50225 295 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 INSL3P51460 131 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 HBG1P69891 147 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 HBG2P69892 147 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 ATP5G2Q06055 141 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 OR8G2PQ6IF36 304 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 Q6ZRG5 221 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 C19orf35Q6ZS72 473 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms