RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
USP39-207ENST00000450066 LOC102723971A0A1B0GUV8 181 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.61
USP39-207ENST00000450066 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 LY6EQ16553 131 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 SLC35E3Q7Z769 313 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.61
USP39-207ENST00000450066 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
USP39-207ENST00000450066 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
USP39-207ENST00000450066 MDFIC2A0A1B0GVS7 189 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 SH2D7A6NKC9 451 aaPredicted RBP11.21□□□□□ -0.62
USP39-207ENST00000450066 PSMB3P49720 205 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 UNQ5815/PRO19632Q6UWF5 114 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 CIARTQ8N365 385 aaPredicted RBP11.21□□□□□ -0.62
USP39-207ENST00000450066 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 FUT9Q9Y231 359 aa11.21□□□□□ -0.62
USP39-207ENST00000450066 PSMB11A5LHX3 300 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 CLN5O75503 358 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 CXorf1O96002 111 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 HIST1H1BP16401 226 aaKnown RBP11.2□□□□□ -0.62
USP39-207ENST00000450066 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
USP39-207ENST00000450066 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 TMEM37Q8WXS4 190 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 FLNAP21333 2647 aaKnown RBP11.2□□□□□ -0.62
USP39-207ENST00000450066 OR5G3P0C626 314 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 CRIP2P52943 208 aaPredicted RBP11.2□□□□□ -0.62
USP39-207ENST00000450066 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 PFDN5Q99471 154 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 RNF2Q99496 336 aa11.2□□□□□ -0.62
USP39-207ENST00000450066 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
USP39-207ENST00000450066 ARL14EPLP0DKL9 152 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 IER3P46695 156 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 DEFA5Q01523 94 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 SVBPQ8N300 66 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
USP39-207ENST00000450066 ZNF48Q96MX3 618 aaPredicted RBP11.19□□□□□ -0.62
USP39-207ENST00000450066 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
USP39-207ENST00000450066 COX7A2P2O60397 106 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 NPBWR1P48145 328 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 SPNS3Q6ZMD2 512 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 OR5R1Q8NH85 324 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 GSX1Q9H4S2 264 aaPredicted RBP11.18□□□□□ -0.62
USP39-207ENST00000450066 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
USP39-207ENST00000450066 G3V318 75 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 IGHG2P01859 326 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 IGF1P05019 195 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 FABP1P07148 127 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 MFAP4P55083 255 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 C19orf54Q5BKX5 351 aa11.18□□□□□ -0.62
USP39-207ENST00000450066 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
USP39-207ENST00000450066 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 TRBV9A0A0B4J1U6 114 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
USP39-207ENST00000450066 OR2J3O76001 311 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 NDUFB8O95169 186 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 TAS2R45P59539 299 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 PLP1P60201 277 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
USP39-207ENST00000450066 GUCA2BQ16661 112 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 TEX29Q8N6K0 151 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 VN1R17PQ8TDU5 208 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 C21orf62Q9NYP8 219 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
USP39-207ENST00000450066 GCHFRP30047 84 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 TIGITQ495A1 244 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 Q6YL49 198 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 DOK5Q9P104 306 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 NDUFS6O75380 124 aaKnown RBP11.16□□□□□ -0.62
USP39-207ENST00000450066 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 PSG1P11464 419 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
USP39-207ENST00000450066 BLCAPP62952 87 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 CYB561D1Q8N8Q1 229 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 TXN2Q99757 166 aa11.16□□□□□ -0.62
USP39-207ENST00000450066 F8W735 103 aaPredicted RBP11.15□□□□□ -0.62
USP39-207ENST00000450066 GNG7O60262 68 aa11.15□□□□□ -0.62
USP39-207ENST00000450066 PAGE4O60829 102 aa11.15□□□□□ -0.62
USP39-207ENST00000450066 HYPMO75409 117 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms