RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 AP4M1O00189 453 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 GOSR1O95249 250 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 S100PP25815 95 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 MORN5Q5VZ52 161 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 PFDN5Q99471 154 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 RNF2Q99496 336 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 CORTO00230 105 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 COX7A2P2O60397 106 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 TOX4O94842 621 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 TBX15Q96SF7 602 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 CD99P14209 185 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 ATP5J2P56134 94 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 C10orf113Q5VZT2 155 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 TMEM116Q8NCL8 245 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 OR4X1Q8NH49 305 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 FAM168AQ92567 244 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 CENPEQ02224 2701 aa12.81□□□□□ -0.36
AP000253.1-201ENST00000449339 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 IGHV4-61A0A0C4DH41 118 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 NBR2O15453 112 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 BPIFB3P59826 476 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 CELSR2Q9HCU4 2923 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 IGHV3-21A0A0B4J1V1 117 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 TGOLN2O43493 480 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 CNIH1O95406 144 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 MOSP00540 346 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 LGALS4P56470 323 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 OR5AU1Q8NGC0 362 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 PERPQ96FX8 193 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 ZNF355PQ9NSJ1 428 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
AP000253.1-201ENST00000449339 LINC00587B1AMM8 73 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BKO60814 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BJP06899 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BOP23527 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BBP33778 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BDP58876 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BCP62807 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HES1Q14469 280 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST2H2BEQ16778 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 C10orf105Q8TEF2 133 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BHQ93079 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BNQ99877 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 HIST1H2BMQ99879 126 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 PIMREGQ9BSJ6 248 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 ABCA1O95477 2261 aa12.79□□□□□ -0.36
AP000253.1-201ENST00000449339 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 NPBQ8NG41 125 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 SFRP2Q96HF1 295 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 TRGV9Q99603 122 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 NDUFA3O95167 84 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 CRYBB3P26998 211 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 CLEC12BQ2HXU8 276 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
AP000253.1-201ENST00000449339 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 C9JCJ5 164 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 PPP1R2P9O14990 202 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 SMIM6P0DI80 62 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 HNF1AP20823 631 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 LINC00305Q7Z4B0 112 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 SRD5A3Q9H8P0 318 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 FBN2P35556 2912 aa12.77□□□□□ -0.36
AP000253.1-201ENST00000449339 POLQO75417 2590 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 PPP5D1E7EU14 171 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 FABP1P07148 127 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 ORM2P19652 201 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 SUMO1P63165 101 aaKnown RBP12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 KCNIP4Q6PIL6 250 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 FRZBQ92765 325 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 WNT10AQ9GZT5 417 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.37
AP000253.1-201ENST00000449339 PHOX2AO14813 284 aa12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 GATCO43716 136 aaKnown RBP12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 GGCTO75223 188 aaKnown RBP12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 PYYP10082 97 aa12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 NDUFA6P56556 154 aa12.76□□□□□ -0.37
AP000253.1-201ENST00000449339 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms