RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 METTL26Q96S19 204 aa11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 PRR13Q9NZ81 148 aa11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RSL24D1Q9UHA3 163 aaKnown RBP11.6□□□□□ -0.55
SPTLC1P1-201ENST00000447199 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 NXPH3O95157 252 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 SLC25A4P12235 298 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 P2RY1P47900 373 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RND2P52198 227 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RBMS2Q15434 407 aaKnown RBP11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 OR1S2Q8NGQ3 325 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 GRAMD2BQ96HH9 432 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RARRES2Q99969 163 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 RABAC1Q9UI14 185 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 SCP2D1Q9UJQ7 156 aa11.59□□□□□ -0.55
SPTLC1P1-201ENST00000447199 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 CA1P00915 261 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 OR10J1P30954 320 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 HSPB7Q9UBY9 170 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 KCNIP3Q9Y2W7 256 aa11.58□□□□□ -0.56
SPTLC1P1-201ENST00000447199 FABP12A6NFH5 140 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NPY1RP25929 384 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 LYZL2Q7Z4W2 148 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 GLMPQ8WWB7 406 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SCGB3A2Q96PL1 93 aa11.57□□□□□ -0.56
SPTLC1P1-201ENST00000447199 CCR6P51684 374 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 KLF9Q13886 244 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 USF2Q15853 346 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 MCFD2Q8NI22 146 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 Q8WTZ3 238 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 PHLDA1Q8WV24 401 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 MCUBQ9NWR8 336 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 U3KQ87 197 aa11.56□□□□□ -0.56
SPTLC1P1-201ENST00000447199 LY6G6CO95867 125 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 AKR1C4P17516 323 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NOXA1Q86UR1 476 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 STHQ8IWL8 128 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 DTD1Q8TEA8 209 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NARS2Q96I59 477 aaKnown RBP11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 KLK5Q9Y337 293 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 V9GYH0 126 aa11.55□□□□□ -0.56
SPTLC1P1-201ENST00000447199 VPS13DQ5THJ4 4388 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 TOMM40O96008 361 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 IL4P05112 153 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 LGI3Q8N145 548 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 Q8NAQ8 132 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 ACY3Q96HD9 319 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 RBKSQ9H477 322 aa11.54□□□□□ -0.56
SPTLC1P1-201ENST00000447199 HELTA6NFD8 242 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 KNCNA6PVL3 124 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 BUB3O43684 328 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 NOL3O60936 208 aaKnown RBP11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 PITX3O75364 302 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 IFNA10P01566 189 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SPP1P10451 314 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 C4BPBP20851 252 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 SRPXP78539 464 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 ZNF79Q15937 498 aa11.53□□□□□ -0.56
SPTLC1P1-201ENST00000447199 ZNF705EA8MWA4 302 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 PSG1P11464 419 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 ANXA3P12429 323 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 AP2S1P53680 142 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 ATP5IP56385 69 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 DHRS2Q13268 280 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 TMEM128Q5BJH2 165 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 C11orf45Q8TAV5 145 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 MFFQ9GZY8 342 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 DNAH10Q8IVF4 4471 aa11.52□□□□□ -0.57
SPTLC1P1-201ENST00000447199 IGKV1D-37A0A075B6S9 117 aa11.51□□□□□ -0.57
SPTLC1P1-201ENST00000447199 DUXBA0A1W2PPF3 345 aa11.51□□□□□ -0.57
SPTLC1P1-201ENST00000447199 DEFB4AO15263 64 aa11.51□□□□□ -0.57
SPTLC1P1-201ENST00000447199 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms