RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 FAM219AQ8IW50 185 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 SELENOHQ8IZQ5 122 aaKnown RBP11.19□□□□□ -0.62
SEC13-213ENST00000445064 OR52E5Q8NH55 327 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 Q8WTZ3 238 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 GPR146Q96CH1 333 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 HRH4Q9H3N8 390 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 X6R8D5 127 aa11.19□□□□□ -0.62
SEC13-213ENST00000445064 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
SEC13-213ENST00000445064 ZNF705EA8MWA4 302 aaPredicted RBP11.18□□□□□ -0.62
SEC13-213ENST00000445064 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SEC13-213ENST00000445064 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 RND2P52198 227 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 DHODHQ02127 395 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 MEF2DQ14814 521 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 GPR107Q5VW38 600 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 C16orf54Q6UWD8 224 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 C15orf40Q8WUR7 153 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 MIXL1Q9H2W2 232 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 CACNG5Q9UF02 275 aa11.18□□□□□ -0.62
SEC13-213ENST00000445064 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
SEC13-213ENST00000445064 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 GABARAPH6UMI1 98 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 NXPH3O95157 252 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 GABARAPO95166 117 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 OR10J1P30954 320 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 EIF2B2P49770 351 aaKnown RBP11.17□□□□□ -0.62
SEC13-213ENST00000445064 YPEL3P61236 119 aaPredicted RBP11.17□□□□□ -0.62
SEC13-213ENST00000445064 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 PSMG4Q5JS54 123 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 Q6ZTC4 211 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 OR1S2Q8NGQ3 325 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 GLMPQ8WWB7 406 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
SEC13-213ENST00000445064 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
SEC13-213ENST00000445064 HELTA6NFD8 242 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 CTDSP2O14595 271 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 RGS5O15539 181 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 SLC25A4P12235 298 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 AP2S1P53680 142 aaPredicted RBP11.16□□□□□ -0.62
SEC13-213ENST00000445064 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
SEC13-213ENST00000445064 TMEM268Q5VZI3 342 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 SLC24A4Q8NFF2 622 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 RNASEH2CQ8TDP1 164 aaKnown RBP11.16□□□□□ -0.62
SEC13-213ENST00000445064 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
SEC13-213ENST00000445064 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.62
SEC13-213ENST00000445064 DISC1C4P0D8 188 aa11.15□□□□□ -0.62
SEC13-213ENST00000445064 IL4P05112 153 aa11.15□□□□□ -0.62
SEC13-213ENST00000445064 ZNF767PQ75MW2 155 aa11.15□□□□□ -0.62
SEC13-213ENST00000445064 CENPSQ8N2Z9 138 aa11.15□□□□□ -0.62
SEC13-213ENST00000445064 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 CRYM-AS1A6NIL9 109 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 RD3LP0DJH9 198 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
SEC13-213ENST00000445064 SURF2Q15527 256 aaPredicted RBP11.14□□□□□ -0.63
SEC13-213ENST00000445064 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
SEC13-213ENST00000445064 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 BUB3O43684 328 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 NPY1RP25929 384 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
SEC13-213ENST00000445064 OR4C16Q8NGL9 310 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
SEC13-213ENST00000445064 H3BMM0 161 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 TOMM40O96008 361 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 IFNA10P01566 189 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 PSG1P11464 419 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
SEC13-213ENST00000445064 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
SEC13-213ENST00000445064 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 SIGLEC15Q6ZMC9 328 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 OR51S1Q8NGJ8 323 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 SMIM4Q8WVI0 70 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 KCNIP3Q9Y2W7 256 aa11.12□□□□□ -0.63
SEC13-213ENST00000445064 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 SULT1A3P0DMM9 295 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 SULT1A4P0DMN0 295 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 IL18Q14116 193 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 SPCS2Q15005 226 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 C1QTNF4Q9BXJ3 329 aa11.11□□□□□ -0.63
SEC13-213ENST00000445064 DEFB1P60022 68 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
SEC13-213ENST00000445064 CLVS1Q8IUQ0 354 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms