RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 PRR13Q9NZ81 148 aa13.48□□□□□ -0.25
VCX3B-203ENST00000444481 DYNC2H1Q8NCM8 4307 aaKnown RBP13.47□□□□□ -0.25
VCX3B-203ENST00000444481 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 LCE6AA0A183 80 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 DNASE2O00115 360 aaPredicted RBP13.47□□□□□ -0.25
VCX3B-203ENST00000444481 SPRY2O43597 315 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 DFFBO76075 338 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
VCX3B-203ENST00000444481 CRYBB3P26998 211 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
VCX3B-203ENST00000444481 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 MAP6D1Q9H9H5 199 aa13.47□□□□□ -0.25
VCX3B-203ENST00000444481 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 TENM2Q9NT68 2774 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 RND2P52198 227 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 TIGITQ495A1 244 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 SPANXN2Q5MJ10 180 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 APRG1Q8IVJ8 170 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 LILRB2Q8N423 598 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 GBGT1Q8N5D6 347 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 Q8WTZ3 238 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 TMEM170AQ8WVE7 144 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 RNF183Q96D59 192 aa13.46□□□□□ -0.25
VCX3B-203ENST00000444481 IFNA10P01566 189 aa13.45□□□□□ -0.26
VCX3B-203ENST00000444481 RPL35AP18077 110 aaKnown RBP13.45□□□□□ -0.26
VCX3B-203ENST00000444481 OR10J1P30954 320 aa13.45□□□□□ -0.26
VCX3B-203ENST00000444481 RPL11P62913 178 aaKnown RBP13.45□□□□□ -0.26
VCX3B-203ENST00000444481 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
VCX3B-203ENST00000444481 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
VCX3B-203ENST00000444481 GRAMD2BQ96HH9 432 aa13.45□□□□□ -0.26
VCX3B-203ENST00000444481 IGHV3-66A0A0C4DH42 116 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 NXPH3O95157 252 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 SLC25A6P12236 298 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 OR1S1Q8NH92 325 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 CSTL1Q9H114 145 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 RBKSQ9H477 322 aa13.44□□□□□ -0.26
VCX3B-203ENST00000444481 P2RY1P47900 373 aa13.43□□□□□ -0.26
VCX3B-203ENST00000444481 EIF2B2P49770 351 aaKnown RBP13.43□□□□□ -0.26
VCX3B-203ENST00000444481 NPIPB3Q92617 1050 aa13.43□□□□□ -0.26
VCX3B-203ENST00000444481 TMED3Q9Y3Q3 217 aa13.43□□□□□ -0.26
VCX3B-203ENST00000444481 U3KQE9 123 aa13.43□□□□□ -0.26
VCX3B-203ENST00000444481 MPTX1A8MV57 137 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 PITX3O75364 302 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 ATF4P18848 351 aaPredicted RBP13.42□□□□□ -0.26
VCX3B-203ENST00000444481 VAMP1P23763 118 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 RBMS2Q15434 407 aaKnown RBP13.42□□□□□ -0.26
VCX3B-203ENST00000444481 ZNF124Q15973 351 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 SRRQ9GZT4 340 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 RABAC1Q9UI14 185 aa13.42□□□□□ -0.26
VCX3B-203ENST00000444481 HELTA6NFD8 242 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 NAP1L6A6NFF2 107 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 SFT2D2O95562 160 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 IFNA4P05014 189 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 HNRNPCP07910 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
VCX3B-203ENST00000444481 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
VCX3B-203ENST00000444481 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
VCX3B-203ENST00000444481 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
VCX3B-203ENST00000444481 LYG2Q86SG7 212 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 CENPSQ8N2Z9 138 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 GATAD1Q8WUU5 269 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
VCX3B-203ENST00000444481 SACSQ9NZJ4 4579 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 LYSTQ99698 3801 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 A0A0J9YWU9 116 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 K7EQG2 157 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 MED6O75586 246 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 JTBO76095 146 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 TOMM40O96008 361 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 RD3LP0DJH9 198 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 INPP1P49441 399 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 DEFB131AP59861 70 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 TMEM217Q8N7C4 229 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
VCX3B-203ENST00000444481 IL4P05112 153 aa13.39□□□□□ -0.27
VCX3B-203ENST00000444481 RAB11AP62491 216 aa13.39□□□□□ -0.27
VCX3B-203ENST00000444481 PPP1R1AQ13522 171 aa13.39□□□□□ -0.27
VCX3B-203ENST00000444481 TRIQKQ629K1 86 aa13.39□□□□□ -0.27
VCX3B-203ENST00000444481 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
VCX3B-203ENST00000444481 CIB3Q96Q77 187 aaPredicted RBP13.39□□□□□ -0.27
VCX3B-203ENST00000444481 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
VCX3B-203ENST00000444481 STHQ8IWL8 128 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 FAM24BQ8N5W8 94 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 OR51G1Q8NGK1 321 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 GLMPQ8WWB7 406 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 SLC35E1Q96K37 410 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 PFDN2Q9UHV9 154 aa13.38□□□□□ -0.27
VCX3B-203ENST00000444481 BUB3O43684 328 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 FABP1P07148 127 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 PSG1P11464 419 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 NUP62P37198 522 aaPredicted RBP13.37□□□□□ -0.27
VCX3B-203ENST00000444481 RPP30P78346 268 aaKnown RBP13.37□□□□□ -0.27
VCX3B-203ENST00000444481 GAMTQ14353 236 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 BAK1Q16611 211 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 LEMD1Q68G75 181 aa13.37□□□□□ -0.27
VCX3B-203ENST00000444481 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms