RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 HRASP01112 189 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 GIPP09681 153 aaPredicted RBP7.26□□□□□ -1.25
SYN3-204ENST00000441821 OR5AC1P0C628 307 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 NUP62P37198 522 aaPredicted RBP7.26□□□□□ -1.25
SYN3-204ENST00000441821 AKR1C2P52895 323 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 RPL30P62888 115 aaKnown RBP7.26□□□□□ -1.25
SYN3-204ENST00000441821 ZNF818PQ6ZRF7 136 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 Q6ZTC4 211 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 FAM219AQ8IW50 185 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 OR51H1Q8NH63 302 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 OR4S2Q8NH73 311 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
SYN3-204ENST00000441821 TMEM222Q9H0R3 208 aa7.26□□□□□ -1.25
SYN3-204ENST00000441821 IGKV1D-13A0A0B4J2D9 117 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 A0A1B0GVG6 124 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 OR2T8A6NH00 312 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 CGB1A6NKQ9 187 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 C15orf61A6NNL5 157 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 C15orf62A8K5M9 175 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 RBFOX2O43251 390 aaKnown RBP eCLIP7.25□□□□□ -1.25
SYN3-204ENST00000441821 CDK2AP2O75956 126 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 AMBPP02760 352 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 RLN2P04090 185 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
SYN3-204ENST00000441821 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 SULT1A3P0DMM9 295 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 SULT1A4P0DMN0 295 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 IGKV1-13P0DP09 117 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 HLA-GP17693 338 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 RPL8P62917 257 aaKnown RBP7.25□□□□□ -1.25
SYN3-204ENST00000441821 RBMY1FQ15415 496 aaKnown RBP7.25□□□□□ -1.25
SYN3-204ENST00000441821 ZFP69Q49AA0 526 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 OR2B11Q5JQS5 317 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 SPSB3Q6PJ21 355 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 BSCL2Q96G97 398 aaPredicted RBP7.25□□□□□ -1.25
SYN3-204ENST00000441821 RNF2Q99496 336 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 C20orf24Q9BUV8 137 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 SMPXQ9UHP9 88 aa7.25□□□□□ -1.25
SYN3-204ENST00000441821 WRBO00258 174 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 TNFSF12O43508 249 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 CDS2O95674 445 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 HPRT1P00492 218 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 MIFP14174 115 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 PVALBP20472 110 aaPredicted RBP7.24□□□□□ -1.25
SYN3-204ENST00000441821 UCP1P25874 307 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 BRWD1-AS2P59051 145 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 FCN2Q15485 313 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 TMEM268Q5VZI3 342 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 SPAG16Q8N0X2 631 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 LRTM2Q8N967 370 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 THAP6Q8TBB0 222 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 TMEM230Q96A57 120 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 MRGPRFQ96AM1 343 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 ATP6V0BQ99437 205 aa7.24□□□□□ -1.25
SYN3-204ENST00000441821 SRSF8Q9BRL6 282 aaKnown RBP7.24□□□□□ -1.25
SYN3-204ENST00000441821 IGHV3OR16-8A0A075B7F1 116 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 IGLC7A0M8Q6 106 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 CHEK1O14757 476 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 CYB5BO43169 146 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 ZNF207O43670 478 aaKnown RBP7.23□□□□□ -1.25
SYN3-204ENST00000441821 HOXB5P09067 269 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 NQO2P16083 231 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 TFPI2P48307 235 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 OR2B8PP59922 312 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
SYN3-204ENST00000441821 SOHLH1Q5JUK2 328 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 Q6ZR54 194 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 H2BFWTQ7Z2G1 175 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 MAPKAPK5-AS1Q8N8E1 139 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 DMBX1Q8NFW5 382 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 LSM10Q969L4 123 aaKnown RBP7.23□□□□□ -1.25
SYN3-204ENST00000441821 C2orf50Q96LR7 162 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 TMEM56Q96MV1 263 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 CHRDL1Q9BU40 450 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 NDUFAF3Q9BU61 184 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 PLEKHA2Q9HB19 425 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 BET1LQ9NYM9 111 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 TMEM56-RWDD3S4R434 201 aa7.23□□□□□ -1.25
SYN3-204ENST00000441821 DEFB131BA0A096LNP1 70 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 A0A0B4J293 547 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 IGHV7-4-1A0A0J9YVY3 117 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 A0A1B0GU03 582 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 L7N2F9 121 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 MED6O75586 246 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 SLC25A6P12236 298 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 LPAR6P43657 344 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 VAMP2P63027 116 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 PAFAH1B2P68402 229 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 IAH1Q2TAA2 248 aaPredicted RBP7.22□□□□□ -1.25
SYN3-204ENST00000441821 SP6Q3SY56 376 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 FAM90A2PQ658T7 463 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 TMEM116Q8NCL8 245 aa7.22□□□□□ -1.25
SYN3-204ENST00000441821 OR2T35Q8NGX2 323 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms