RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 C15orf62A8K5M9 175 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 A8MWP6 167 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 H3BP45 60 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 CORTO00230 105 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 NDUFA4O00483 81 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 SYNGR2O43760 224 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 TMEM50AO95807 157 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 IFNA4P05014 189 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 NPBWR1P48145 328 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 RND2P52198 227 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-207ENST00000439974 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 DEFB125Q8N687 156 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 OR4D5Q8NGN0 318 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 WDR89Q96FK6 387 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-207ENST00000439974 ACY3Q96HD9 319 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 TXN2Q99757 166 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 UFC1Q9Y3C8 167 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 U3KQ87 197 aa12.04□□□□□ -0.48
ITGB1-207ENST00000439974 OR11H12B2RN74 326 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 SSSCA1O60232 199 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 CLN5O75503 358 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-207ENST00000439974 C12orf45Q8N5I9 185 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-207ENST00000439974 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 RNASEH2CQ8TDP1 164 aaKnown RBP12.03□□□□□ -0.48
ITGB1-207ENST00000439974 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 WFDC10AQ9H1F0 79 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 CACFD1Q9UGQ2 172 aa12.03□□□□□ -0.48
ITGB1-207ENST00000439974 RPS10-NUDT3A0A1W2PQS6 291 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 MED6O75586 246 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 SCAF4O95104 1147 aaKnown RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 NKX2-1P43699 371 aaPredicted RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 SPANXN5Q5MJ07 72 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 TOMM20LQ6UXN7 152 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 SLC16A13Q7RTY0 426 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 ZBTB8BQ8NAP8 495 aaPredicted RBP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 IL17DQ8TAD2 202 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 FAM110AQ9BQ89 295 aa12.02□□□□□ -0.49
ITGB1-207ENST00000439974 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITGB1-207ENST00000439974 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
ITGB1-207ENST00000439974 IGKV1-17P01599 117 aa12.01□□□□□ -0.49
ITGB1-207ENST00000439974 ID3Q02535 119 aa12.01□□□□□ -0.49
ITGB1-207ENST00000439974 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
ITGB1-207ENST00000439974 DAZ1Q9NQZ3 744 aaKnown RBP12.01□□□□□ -0.49
ITGB1-207ENST00000439974 C5orf51A6NDU8 294 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 CCNKO75909 580 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 APOHP02749 345 aaPredicted RBP12□□□□□ -0.49
ITGB1-207ENST00000439974 IGLC1P0CG04 106 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 C8orf88P0DMB2 117 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 OR10J1P30954 320 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 DEFA1P59665 94 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 DEFA3P59666 94 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 NOXA1Q86UR1 476 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 ZFAND3Q9H8U3 227 aa12□□□□□ -0.49
ITGB1-207ENST00000439974 MRPL27Q9P0M9 148 aaKnown RBP12□□□□□ -0.49
ITGB1-207ENST00000439974 SIX6O95475 246 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 MBPP02686 304 aaPredicted RBP11.99□□□□□ -0.49
ITGB1-207ENST00000439974 IL5P05113 134 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 SLC25A4P12235 298 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 ELLP55199 621 aaPredicted RBP11.99□□□□□ -0.49
ITGB1-207ENST00000439974 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 CIB3Q96Q77 187 aaPredicted RBP11.99□□□□□ -0.49
ITGB1-207ENST00000439974 PSENENQ9NZ42 101 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 RCL1Q9Y2P8 373 aaKnown RBP11.99□□□□□ -0.49
ITGB1-207ENST00000439974 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
ITGB1-207ENST00000439974 ALMS1Q8TCU4 4167 aa11.99□□□□□ -0.49
ITGB1-207ENST00000439974 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 PAX9P55771 341 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 RAB11AP62491 216 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 GAMTQ14353 236 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 LILRB2Q8N423 598 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 TMEM116Q8NCL8 245 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 SMPXQ9UHP9 88 aa11.98□□□□□ -0.49
ITGB1-207ENST00000439974 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
ITGB1-207ENST00000439974 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 K7EMT4 169 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 CHEK1O14757 476 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 JTBO76095 146 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 OR8G2PQ6IF36 304 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
ITGB1-207ENST00000439974 OR1S2Q8NGQ3 325 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 ST8SIA2Q92186 375 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 SLC35E1Q96K37 410 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 RNF2Q99496 336 aa11.97□□□□□ -0.49
ITGB1-207ENST00000439974 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms