RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 C20orf144Q9BQM9 153 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 CD99P14209 185 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 TPPP2P59282 170 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 MMDQ15546 238 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 C2orf83Q53S99 150 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 SLC45A2Q9UMX9 530 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 EPG5Q9HCE0 2579 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 AKAP6Q13023 2319 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 PSG5Q15238 335 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 TIMD4Q96H15 378 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 USP9XQ93008 2570 aaPredicted RBP11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 DOPEY1Q5JWR5 2465 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 M0QZK8 103 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 FCN1O00602 326 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 KRTDAPP60985 99 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 SELENOTP62341 195 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 TMEM177Q53S58 311 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 Q6ZVH6 145 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 OR1L8Q8NGR8 309 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 RITA1Q96K30 269 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 ABCA1O95477 2261 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 MYO18BQ8IUG5 2567 aa11.17□□□□□ -0.62
PTCHD3-201ENST00000438700 SLC25A17O43808 307 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 PCP4P48539 62 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 OR1L6Q8NGR2 347 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 ZNF430Q9H8G1 570 aaPredicted RBP11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 SNURFLB1AK76 121 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 TCF21O43680 179 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 OR7C2O60412 319 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 NDUFS7O75251 213 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 OR10J4P0C629 311 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 USF1P22415 310 aaPredicted RBP11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 WT1-ASQ06250 92 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 CD69Q07108 199 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 C11orf42Q8N5U0 333 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 Q8N976 141 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 ST6GALNAC6Q969X2 333 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 CHODLQ9H9P2 273 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
PTCHD3-201ENST00000438700 REG1AP05451 166 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 GAGE1Q13065 139 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 RCHY1Q96PM5 261 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 CGB1A6NKQ9 187 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 MT-CO2P00403 227 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 IGLV2-23P01705 113 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 APELAP0DMC3 54 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 PAFAH1B2P68402 229 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 CSMD1Q96PZ7 3565 aa11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 ASH1LQ9NR48 2969 aaKnown RBP11.15□□□□□ -0.62
PTCHD3-201ENST00000438700 OR8I2Q8N0Y5 310 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 STPG4Q8N801 248 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 BTF3L4Q96K17 158 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 IL36BQ9NZH7 164 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 PPIAL4CA0A0B4J2A2 164 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 VSTM2AQ8TAG5 236 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
PTCHD3-201ENST00000438700 TCL1AP56279 114 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 MORN5Q5VZ52 161 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 WNT10AQ9GZT5 417 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 NDUFB8O95169 186 aa11.13□□□□□ -0.63
PTCHD3-201ENST00000438700 GPX1P07203 203 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms