RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MORN3Q6PF18 240 aaPredicted RBP5.68□□□□□ -1.5
VPS50-204ENST00000438395 HEYLQ9NQ87 328 aaPredicted RBP5.68□□□□□ -1.5
VPS50-204ENST00000438395 C14orf166Q9Y224 244 aaKnown RBP5.68□□□□□ -1.5
VPS50-204ENST00000438395 A0A0B4J293 547 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 TEX13DA0A0J9YY54 714 aaPredicted RBP5.67□□□□□ -1.5
VPS50-204ENST00000438395 CEBPZOSA8MTT3 80 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 CLN5O75503 358 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 RAB3DO95716 219 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 TMEM50AO95807 157 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 IGKV1-5P01602 117 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 APOHP02749 345 aaPredicted RBP5.67□□□□□ -1.5
VPS50-204ENST00000438395 CD3DP04234 171 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 RNASE2P10153 161 aaKnown RBP5.67□□□□□ -1.5
VPS50-204ENST00000438395 MIFP14174 115 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 ELK1P19419 428 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 ETV6P41212 452 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 HTR2BP41595 481 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 SPCS3P61009 180 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 NUTF2P61970 127 aaKnown RBP5.67□□□□□ -1.5
VPS50-204ENST00000438395 SNRPD3P62318 126 aaKnown RBP5.67□□□□□ -1.5
VPS50-204ENST00000438395 FAM219AQ8IW50 185 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 TP53RKQ96S44 253 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 FUNDC2Q9BWH2 189 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 HRH4Q9H3N8 390 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 EXTL2Q9UBQ6 330 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 CACFD1Q9UGQ2 172 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 PFDN2Q9UHV9 154 aa5.67□□□□□ -1.5
VPS50-204ENST00000438395 TRAV10A0A0B4J240 114 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 A0A1B0GU03 582 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 INS-IGF2F8WCM5 200 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 RGS5O15539 181 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 GSTZ1O43708 216 aaPredicted RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 SLC25A4P12235 298 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 CRYBB3P26998 211 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 HLA-DMBP28068 263 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 NUP62P37198 522 aaPredicted RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 RPL5P46777 297 aaKnown RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 RND2P52198 227 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 AP2S1P53680 142 aaPredicted RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 TAS2R19P59542 299 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 DHRS2Q13268 280 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 MEF2DQ14814 521 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 SP6Q3SY56 376 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 ETFRF1Q6IPR1 90 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 NOXA1Q86UR1 476 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 FAM24BQ8N5W8 94 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 OR1S2Q8NGQ3 325 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 OR13C8Q8NGS7 320 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 OR52I2Q8NH67 350 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 TERB2Q8NHR7 220 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 Q8WTZ3 238 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 C1QTNF4Q9BXJ3 329 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.66□□□□□ -1.5
VPS50-204ENST00000438395 KLK11Q9UBX7 282 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 TBC1D24Q9ULP9 559 aa5.66□□□□□ -1.5
VPS50-204ENST00000438395 DISC1C4P0D8 188 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 K7EQG2 157 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 HNRNPCP07910 306 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS50-204ENST00000438395 ZNF182P17025 639 aaPredicted RBP5.65□□□□□ -1.5
VPS50-204ENST00000438395 UCP1P25874 307 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 OR10J1P30954 320 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 MRPS10P82664 201 aaKnown RBP5.65□□□□□ -1.5
VPS50-204ENST00000438395 TIGITQ495A1 244 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 STEAP1BQ6NZ63 245 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 LILRB2Q8N423 598 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 Q8NAQ8 132 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 SLC24A4Q8NFF2 622 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 MARCH1Q8TCQ1 289 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 RNASEH2CQ8TDP1 164 aaKnown RBP5.65□□□□□ -1.5
VPS50-204ENST00000438395 RBPMSQ93062 196 aaKnown RBP5.65□□□□□ -1.5
VPS50-204ENST00000438395 ACY3Q96HD9 319 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 ABHD1Q96SE0 405 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 TMEM222Q9H0R3 208 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 FNDC4Q9H6D8 234 aaPredicted RBP5.65□□□□□ -1.5
VPS50-204ENST00000438395 MTFP1Q9UDX5 166 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 CACNG5Q9UF02 275 aa5.65□□□□□ -1.5
VPS50-204ENST00000438395 IFNA10P01566 189 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 IL4P05112 153 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 FABP1P07148 127 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 OR5AC1P0C628 307 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 P0C879 139 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 RD3LP0DJH9 198 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 NPY1RP25929 384 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 DHODHQ02127 395 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 SURF2Q15527 256 aaPredicted RBP5.64□□□□□ -1.51
VPS50-204ENST00000438395 GPR107Q5VW38 600 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 TMEM268Q5VZI3 342 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 Q6ZTC4 211 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 LHFPL1Q86WI0 220 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 TMEM229BQ8NBD8 167 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 CLEC5AQ9NY25 188 aa5.64□□□□□ -1.51
VPS50-204ENST00000438395 IGHV4-4A0A075B6R2 117 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms