RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FAM219AQ8IW50 185 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 TP53RKQ96S44 253 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 FUNDC2Q9BWH2 189 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 HRH4Q9H3N8 390 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 EXTL2Q9UBQ6 330 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 CACFD1Q9UGQ2 172 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 PFDN2Q9UHV9 154 aa5.67□□□□□ -1.5
VPS50-203ENST00000436177 TRAV10A0A0B4J240 114 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 A0A1B0GU03 582 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 INS-IGF2F8WCM5 200 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 RGS5O15539 181 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 GSTZ1O43708 216 aaPredicted RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 SLC25A4P12235 298 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 CRYBB3P26998 211 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 HLA-DMBP28068 263 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 NUP62P37198 522 aaPredicted RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 RPL5P46777 297 aaKnown RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 RND2P52198 227 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 AP2S1P53680 142 aaPredicted RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 TAS2R19P59542 299 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 DHRS2Q13268 280 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 MEF2DQ14814 521 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 SP6Q3SY56 376 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 ETFRF1Q6IPR1 90 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 NOXA1Q86UR1 476 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 FAM24BQ8N5W8 94 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 OR1S2Q8NGQ3 325 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 OR13C8Q8NGS7 320 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 OR52I2Q8NH67 350 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 TERB2Q8NHR7 220 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 Q8WTZ3 238 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 C1QTNF4Q9BXJ3 329 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.66□□□□□ -1.5
VPS50-203ENST00000436177 KLK11Q9UBX7 282 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 TBC1D24Q9ULP9 559 aa5.66□□□□□ -1.5
VPS50-203ENST00000436177 DISC1C4P0D8 188 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 K7EQG2 157 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 HNRNPCP07910 306 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS50-203ENST00000436177 ZNF182P17025 639 aaPredicted RBP5.65□□□□□ -1.5
VPS50-203ENST00000436177 UCP1P25874 307 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 OR10J1P30954 320 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 MRPS10P82664 201 aaKnown RBP5.65□□□□□ -1.5
VPS50-203ENST00000436177 TIGITQ495A1 244 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 STEAP1BQ6NZ63 245 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 LILRB2Q8N423 598 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 Q8NAQ8 132 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 SLC24A4Q8NFF2 622 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 MARCH1Q8TCQ1 289 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 RNASEH2CQ8TDP1 164 aaKnown RBP5.65□□□□□ -1.5
VPS50-203ENST00000436177 RBPMSQ93062 196 aaKnown RBP5.65□□□□□ -1.5
VPS50-203ENST00000436177 ACY3Q96HD9 319 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 ABHD1Q96SE0 405 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 TMEM222Q9H0R3 208 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 FNDC4Q9H6D8 234 aaPredicted RBP5.65□□□□□ -1.5
VPS50-203ENST00000436177 MTFP1Q9UDX5 166 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 CACNG5Q9UF02 275 aa5.65□□□□□ -1.5
VPS50-203ENST00000436177 NPIPB6E9PJ23 425 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 IFNA10P01566 189 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 IL4P05112 153 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 FABP1P07148 127 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 OR5AC1P0C628 307 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 P0C879 139 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 RD3LP0DJH9 198 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 NPY1RP25929 384 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 DHODHQ02127 395 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 SURF2Q15527 256 aaPredicted RBP5.64□□□□□ -1.51
VPS50-203ENST00000436177 GPR107Q5VW38 600 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 TMEM268Q5VZI3 342 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 Q6ZTC4 211 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 LHFPL1Q86WI0 220 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 TMEM229BQ8NBD8 167 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 CLEC5AQ9NY25 188 aa5.64□□□□□ -1.51
VPS50-203ENST00000436177 IGHV4-4A0A075B6R2 117 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 A0A0G2JRQ6 117 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 FAM90A26D6RGX4 464 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 GABARAPH6UMI1 98 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 GABARAPO95166 117 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 CD74P04233 296 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 IGLC1P0CG04 106 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
VPS50-203ENST00000436177 RBMY1CP0DJD4 496 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 SULT1A3P0DMM9 295 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 SULT1A4P0DMN0 295 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 C4BPBP20851 252 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 ID1P41134 155 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 YPEL3P61236 119 aaPredicted RBP5.63□□□□□ -1.51
VPS50-203ENST00000436177 SSBP1Q04837 148 aaKnown RBP5.63□□□□□ -1.51
VPS50-203ENST00000436177 RBMY1FQ15415 496 aaKnown RBP5.63□□□□□ -1.51
VPS50-203ENST00000436177 BSXQ3C1V8 233 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 PVRIGQ6DKI7 326 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 PRSS54Q6PEW0 395 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 SIGLEC15Q6ZMC9 328 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 OR4D10Q8NGI6 311 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms