RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 IL36BQ9NZH7 164 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 APELAP0DMC3 54 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 MMDQ15546 238 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 TIGITQ495A1 244 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 COA6Q5JTJ3 125 aaKnown RBP13.34□□□□□ -0.27
LIMK1-203ENST00000435201 TMEM183AQ8IXX5 376 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 CFHR4Q92496 578 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 PLXNB1O43157 2135 aa13.34□□□□□ -0.27
LIMK1-203ENST00000435201 NBR2O15453 112 aa13.33□□□□□ -0.27
LIMK1-203ENST00000435201 NPBQ8NG41 125 aa13.33□□□□□ -0.27
LIMK1-203ENST00000435201 FCN1O00602 326 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 PYYP10082 97 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 ERVFC1-1P60608 527 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 RPL15P61313 204 aaKnown RBP13.33□□□□□ -0.28
LIMK1-203ENST00000435201 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 OR1B1Q8NGR6 318 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 HILPDAQ9Y5L2 63 aa13.33□□□□□ -0.28
LIMK1-203ENST00000435201 XKRY2A2RUG3 117 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 NDUFA3O95167 84 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 CNIH1O95406 144 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 ORM2P19652 201 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 TAS2R60P59551 318 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 PLP1P60201 277 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 KLRD1Q13241 179 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 PDZD11Q5EBL8 140 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 RUSC1-AS1Q66K80 236 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 IGF2BP2-AS1Q96M15 143 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 TRAPPC1Q9Y5R8 145 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 NBASA2RRP1 2371 aa13.32□□□□□ -0.28
LIMK1-203ENST00000435201 A0A1W2PPR1 153 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 A6NNC1 897 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 HYPMO75409 117 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 RPEL1Q2QD12 228 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 CCDC144NLQ6NUI1 221 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 ITLN2Q8WWU7 325 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-203ENST00000435201 OSTCQ9NRP0 149 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 CDC42EP3Q9UKI2 254 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 GCGP01275 180 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 CDKN1AP38936 164 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 PDLIM4P50479 330 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
LIMK1-203ENST00000435201 ZNF329Q86UD4 541 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 UBTD1Q9HAC8 227 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 V9GYV3 84 aa13.31□□□□□ -0.28
LIMK1-203ENST00000435201 HRNRQ86YZ3 2850 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-203ENST00000435201 ZZEF1O43149 2961 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 I3L2K1 104 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 FABP4P15090 132 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 YPEL3P61236 119 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-203ENST00000435201 OR5I1Q13606 314 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 VMO1Q7Z5L0 202 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 LHFPL4Q7Z7J7 247 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 WNT10AQ9GZT5 417 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 RELNP78509 3460 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 COL6A6A6NMZ7 2263 aa13.3□□□□□ -0.28
LIMK1-203ENST00000435201 IGHV3-21A0A0B4J1V1 117 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 SLC17A3O00476 420 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 ISLRO14498 428 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 FABP1P07148 127 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 PYY3Q5JQD4 70 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 MINOS1Q5TGZ0 78 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 MINOS1-NBL1R4GNA1 71 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 LRBAP50851 2863 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 PEX7O00628 323 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 IGLV2-8P01709 118 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 IGLC1P0CG04 106 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 EFNA4P52798 201 aa13.29□□□□□ -0.28
LIMK1-203ENST00000435201 RPL19P84098 196 aaKnown RBP13.29□□□□□ -0.28
LIMK1-203ENST00000435201 PACRGQ96M98 296 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-203ENST00000435201 MYCNOSP40205 109 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 LGALS4P56470 323 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 HES1Q14469 280 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 FXYD3Q14802 87 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 C5orf64Q2M2E5 130 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 RASL11BQ9BPW5 248 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 GSN-AS1Q9NRJ2 163 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 HIGD1AQ9Y241 93 aa13.28□□□□□ -0.28
LIMK1-203ENST00000435201 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.28
LIMK1-203ENST00000435201 MGST1P10620 155 aaKnown RBP13.27□□□□□ -0.29
LIMK1-203ENST00000435201 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-203ENST00000435201 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.29
LIMK1-203ENST00000435201 IBA57Q5T440 356 aaKnown RBP13.27□□□□□ -0.29
LIMK1-203ENST00000435201 ARHGAP32A7KAX9 2087 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 TRBV9A0A0B4J1U6 114 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 PSG1P11464 419 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 GP9P14770 177 aa13.26□□□□□ -0.29
LIMK1-203ENST00000435201 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
LIMK1-203ENST00000435201 GNLYP22749 145 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms