RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SRPXP78539 464 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 TMEM128Q5BJH2 165 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 WFDC3Q8IUB2 231 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 DEDD2Q8WXF8 326 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 MS4A6AQ9H2W1 248 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 TP53TG1Q9Y2A0 90 aa16.36■□□□□ 0.21
SEMA3B-205ENST00000434030 SPRY2O43597 315 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 IGLC1P0CG04 106 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 CRYBB3P26998 211 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 RND2P52198 227 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 DEFB135Q30KP9 77 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 NOXA1Q86UR1 476 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 STPG3Q8N7X2 389 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 OR1S2Q8NGQ3 325 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 METTL26Q96S19 204 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 SLC25A21Q9BQT8 299 aaPredicted RBP16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 RBKSQ9H477 322 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 TMEM231Q9H6L2 316 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 MAP6D1Q9H9H5 199 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 U3KQ87 197 aa16.35■□□□□ 0.21
SEMA3B-205ENST00000434030 AGRNO00468 2067 aa16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 A0A1W2PS18 150 aa16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 IFNA10P01566 189 aa16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 RPL11P62913 178 aaKnown RBP16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 ETFRF1Q6IPR1 90 aa16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 DTD1Q8TEA8 209 aa16.34■□□□□ 0.21
SEMA3B-205ENST00000434030 PIGBOS1A0A0B4J2F0 54 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 LCE6AA0A183 80 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 DNASE2O00115 360 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 OR10J1P30954 320 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 YPEL3P61236 119 aaPredicted RBP16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 SPANXN2Q5MJ10 180 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 NPIPB3Q92617 1050 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 SRRQ9GZT4 340 aa16.33■□□□□ 0.2
SEMA3B-205ENST00000434030 SACSQ9NZJ4 4579 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 TRAV2A0A0B4J234 112 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 DUXBA0A1W2PPF3 345 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 RBMS2Q15434 407 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 LRTM2Q8N967 370 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 OR1S1Q8NH92 325 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 Q8WTZ3 238 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 RNF183Q96D59 192 aa16.32■□□□□ 0.2
SEMA3B-205ENST00000434030 PITX3O75364 302 aa16.31■□□□□ 0.2
SEMA3B-205ENST00000434030 VAMP1P23763 118 aa16.31■□□□□ 0.2
SEMA3B-205ENST00000434030 P2RY1P47900 373 aa16.31■□□□□ 0.2
SEMA3B-205ENST00000434030 FAM24BQ8N5W8 94 aa16.31■□□□□ 0.2
SEMA3B-205ENST00000434030 U3KQE9 123 aa16.31■□□□□ 0.2
SEMA3B-205ENST00000434030 ACY3Q96HD9 319 aa16.3■□□□□ 0.2
SEMA3B-205ENST00000434030 NARS2Q96I59 477 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-205ENST00000434030 CSTL1Q9H114 145 aa16.3■□□□□ 0.2
SEMA3B-205ENST00000434030 RABAC1Q9UI14 185 aa16.3■□□□□ 0.2
SEMA3B-205ENST00000434030 A0A0J9YWU9 116 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 SFT2D2O95562 160 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 ATP5IP56385 69 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 DEFB131AP59861 70 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 PPP1R1AQ13522 171 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 BAK1Q16611 211 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 LYG2Q86SG7 212 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 CENPSQ8N2Z9 138 aa16.29■□□□□ 0.2
SEMA3B-205ENST00000434030 RYR2Q92736 4967 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 K7EQG2 157 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 IFNA4P05014 189 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 HNRNPCP07910 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 SLC25A6P12236 298 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 LEMD1Q68G75 181 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 STXBP6Q8NFX7 210 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 GRAMD2BQ96HH9 432 aa16.28■□□□□ 0.2
SEMA3B-205ENST00000434030 MPTX1A8MV57 137 aa16.27■□□□□ 0.2
SEMA3B-205ENST00000434030 TOMM40O96008 361 aa16.27■□□□□ 0.2
SEMA3B-205ENST00000434030 IL4P05112 153 aa16.27■□□□□ 0.2
SEMA3B-205ENST00000434030 USF2Q15853 346 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-205ENST00000434030 TMED3Q9Y3Q3 217 aa16.27■□□□□ 0.2
SEMA3B-205ENST00000434030 RD3LP0DJH9 198 aa16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 GPX4P36969 197 aaPredicted RBP16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 EWSR1Q01844 656 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 C16orf54Q6UWD8 224 aa16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 DCANP1Q8TF63 244 aa16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 GLMPQ8WWB7 406 aa16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 SDHCQ99643 169 aaPredicted RBP16.26■□□□□ 0.19
SEMA3B-205ENST00000434030 NAP1L6A6NFF2 107 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 FAM90A26D6RGX4 464 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 HOXB5P09067 269 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 IAPPP10997 89 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 PSG1P11464 419 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 INPP1P49441 399 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 GAMTQ14353 236 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 TRIQKQ629K1 86 aa16.25■□□□□ 0.19
SEMA3B-205ENST00000434030 UBE2MP61081 183 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-205ENST00000434030 IGKV1D-37A0A075B6S9 117 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 HELTA6NFD8 242 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 MED6O75586 246 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 NDUFB6O95139 128 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 EIF2B2P49770 351 aaKnown RBP16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 AP2S1P53680 142 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 STHQ8IWL8 128 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 OR51G1Q8NGK1 321 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 GATAD1Q8WUU5 269 aa16.23■□□□□ 0.19
SEMA3B-205ENST00000434030 LINC00854A0A1B0GVQ3 168 aa16.22■□□□□ 0.19
SEMA3B-205ENST00000434030 C9orf170A2RU37 121 aa16.22■□□□□ 0.19
SEMA3B-205ENST00000434030 BUB3O43684 328 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms