RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DHODHQ02127 395 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 CTF1Q16619 201 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 MLANAQ16655 118 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 GPR107Q5VW38 600 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 ETFRF1Q6IPR1 90 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 Q6ZRM9 215 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 SLC24A4Q8NFF2 622 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 Q8WTZ3 238 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 GLYATL2Q8WU03 294 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 NAA60Q9H7X0 242 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 SEPSECSQ9HD40 501 aaKnown RBP10.81□□□□□ -0.68
MSH5-208ENST00000429846 HEYLQ9NQ87 328 aaPredicted RBP10.81□□□□□ -0.68
MSH5-208ENST00000429846 APLNQ9ULZ1 77 aa10.81□□□□□ -0.68
MSH5-208ENST00000429846 TEX13DA0A0J9YY54 714 aaPredicted RBP10.8□□□□□ -0.68
MSH5-208ENST00000429846 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
MSH5-208ENST00000429846 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 OR10J1P30954 320 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 RND2P52198 227 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRR20EP86478 221 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRR20CP86479 221 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRR20DP86480 221 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRR20BP86481 221 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRR20AP86496 221 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 DHRS2Q13268 280 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
MSH5-208ENST00000429846 ACTL10Q5JWF8 245 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 PRSS54Q6PEW0 395 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 C16orf54Q6UWD8 224 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 NOXA1Q86UR1 476 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 GLMPQ8WWB7 406 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 C1QTNF4Q9BXJ3 329 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 CACNG5Q9UF02 275 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 TBC1D24Q9ULP9 559 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 X6R8D5 127 aa10.8□□□□□ -0.68
MSH5-208ENST00000429846 TRAV10A0A0B4J240 114 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 KNCNA6PVL3 124 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 DISC1C4P0D8 188 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 GSTZ1O43708 216 aaPredicted RBP10.79□□□□□ -0.68
MSH5-208ENST00000429846 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 SNRPD3P62318 126 aaKnown RBP10.79□□□□□ -0.68
MSH5-208ENST00000429846 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 LHFPL5Q8TAF8 219 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 SMIM4Q8WVI0 70 aa10.79□□□□□ -0.68
MSH5-208ENST00000429846 NAA50Q9GZZ1 169 aaKnown RBP10.79□□□□□ -0.68
MSH5-208ENST00000429846 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 CEBPZOSA8MTT3 80 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 RGS5O15539 181 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 IL4P05112 153 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 NPY1RP25929 384 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 NUP62P37198 522 aaPredicted RBP10.78□□□□□ -0.68
MSH5-208ENST00000429846 PSMG4Q5JS54 123 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 TMEM268Q5VZI3 342 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 Q6ZTC4 211 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 SELENOHQ8IZQ5 122 aaKnown RBP10.78□□□□□ -0.68
MSH5-208ENST00000429846 RAB40CQ96S21 281 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 RTBDNQ9BSG5 229 aaPredicted RBP10.78□□□□□ -0.68
MSH5-208ENST00000429846 NRN1Q9NPD7 142 aa10.78□□□□□ -0.68
MSH5-208ENST00000429846 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 TOMM40O96008 361 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 USF2Q15853 346 aaPredicted RBP10.77□□□□□ -0.69
MSH5-208ENST00000429846 FAAP20Q6NZ36 180 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 IL22RA2Q969J5 263 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 GPR146Q96CH1 333 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 PRRT1Q99946 306 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 RNF126Q9BV68 326 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 RABL2AQ9UBK7 228 aaPredicted RBP10.77□□□□□ -0.69
MSH5-208ENST00000429846 RABL2BQ9UNT1 228 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 GPR132Q9UNW8 380 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 TMEM56-RWDD3S4R434 201 aa10.77□□□□□ -0.69
MSH5-208ENST00000429846 ELOA3CA0A087WX78 387 aaPredicted RBP10.76□□□□□ -0.69
MSH5-208ENST00000429846 BUB3O43684 328 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 AMBPP02760 352 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 AKAIN1P0CW23 69 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 SULT1A3P0DMM9 295 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 SULT1A4P0DMN0 295 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 NMSQ5H8A3 153 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 SIGLEC15Q6ZMC9 328 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 MIXL1Q9H2W2 232 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 PFDN2Q9UHV9 154 aa10.76□□□□□ -0.69
MSH5-208ENST00000429846 CTDSPLO15194 276 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 RD3LP0DJH9 198 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 SMIM18P0DKX4 95 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 OR4C16Q8NGL9 310 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 NPIPB3Q92617 1050 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 KCNIP3Q9Y2W7 256 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 U3KQ87 197 aa10.75□□□□□ -0.69
MSH5-208ENST00000429846 H3BMM0 161 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 IFNA10P01566 189 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 HLA-DRB4P13762 266 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 OR8G2PQ6IF36 304 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 OR51G1Q8NGK1 321 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 ACY3Q96HD9 319 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 HLA-DRB4X5D2U9 266 aa10.74□□□□□ -0.69
MSH5-208ENST00000429846 DEFB131BA0A096LNP1 70 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms