RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 DPPA2Q7Z7J5 298 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GAPTQ8N292 157 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 C9orf62Q8N4C0 152 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TOMM5Q8N4H5 51 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR11G2Q8NGC1 345 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR4K13Q8NH42 304 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR5AK2Q8NH90 309 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MFSD8Q8NHS3 518 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OTOSQ8NHW6 89 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GPR119Q8TDV5 335 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF431Q8TF32 576 aaPredicted RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 BLNKQ8WV28 456 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ASB17Q8WXJ9 295 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CLDN23Q96B33 292 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 S100A16Q96FQ6 103 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TSPAN32Q96QS1 320 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 NMNAT3Q96T66 252 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 LINC01587Q99440 93 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TBX5Q99593 518 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 POTEKPQ9BYX7 375 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF436Q9C0F3 470 aaPredicted RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 HDHD2Q9H0R4 259 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MED28Q9H204 178 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 RERGLQ9H628 205 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 RHOFQ9HBH0 211 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 HRASLSQ9HDD0 168 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MED9Q9NWA0 146 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 PAQR5Q9NXK6 330 aaPredicted RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TAS2R8Q9NYW2 309 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR5V1Q9UGF6 321 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MRM2Q9UI43 246 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SCP2D1Q9UJQ7 156 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GNG8Q9UK08 70 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MCTS1Q9ULC4 181 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CARHSP1Q9Y2V2 147 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MTCH2Q9Y6C9 303 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 U3KQ87 197 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 XIRP2A4UGR9 3374 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 FREM1Q5H8C1 2179 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SZT2Q5T011 3432 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GPR179Q6PRD1 2367 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 LAMA1P25391 3075 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 SDK2Q58EX2 2172 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1OR2-108A0A075B7D4 117 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 IGHV3-21A0A0B4J1V1 117 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 IGHV3-43A0A0B4J1X8 118 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1B0GTI1 187 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 LINC00854A0A1B0GVQ3 168 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1B0GW15 77 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1B0GX78 115 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 A6NED7 52 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GGT3PA6NGU5 568 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 MCRIP1C9JLW8 97 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 F5H5P2 479 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 M0QXV9 152 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CREBL2O60519 120 aaPredicted RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 AHSA1O95433 338 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 IFNA7P01567 189 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 IGLV3-1P01715 115 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CD2P06729 351 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CECR9P0C854 216 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 AKAIN1P0CW23 69 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CTLA4P16410 223 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF708P17019 499 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CCL1P22362 96 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 NFYAP23511 347 aaPredicted RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CDK2P24941 298 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HSD11B1P28845 292 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GRPRP30550 384 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 AP2S1P53680 142 aaPredicted RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TAS2R20P59543 309 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ACTBP60709 375 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 LSM6P62312 80 aaKnown RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ACTG1P63261 375 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HIST1H3AP68431 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 QRFPP83859 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 H3F3AP84243 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GLO1Q04760 184 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GRK1Q15835 563 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HIST3H3Q16695 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 KRTAP25-1Q3LHN0 102 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CLLU1Q5K131 121 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CLVS2Q5SYC1 327 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 BCL2L15Q5TBC7 163 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HIST2H3PS2Q5TEC6 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 C1orf140Q5VVS0 124 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GLT8D1Q68CQ7 371 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 LPCAT3Q6P1A2 487 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 DNM1P34Q6PK57 102 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CLEC18BQ6UXF7 455 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 Q6ZS52 159 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HIST2H3AQ71DI3 136 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 MARCH3Q86UD3 253 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 MED12LQ86YW9 2145 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ZFP82Q8N141 532 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 SLC25A45Q8N413 288 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 EIF4E3Q8N5X7 224 aaKnown RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF676Q8N7Q3 588 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM229BQ8NBD8 167 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TSTD1Q8NFU3 115 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms