RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 RNASEH2CQ8TDP1 164 aaKnown RBP13.76□□□□□ -0.21
VARS2-202ENST00000421263 TMEM170AQ8WVE7 144 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 HEYLQ9NQ87 328 aaPredicted RBP13.76□□□□□ -0.21
VARS2-202ENST00000421263 AGRNO00468 2067 aa13.76□□□□□ -0.21
VARS2-202ENST00000421263 DEFB4AO15263 64 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 AKAIN1P0CW23 69 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 SLC25A4P12235 298 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 TMEM41BQ5BJD5 291 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
VARS2-202ENST00000421263 C16orf54Q6UWD8 224 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 Q8NAQ8 132 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 STXBP6Q8NFX7 210 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 OR4C16Q8NGL9 310 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 RABL2AQ9UBK7 228 aaPredicted RBP13.75□□□□□ -0.21
VARS2-202ENST00000421263 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 RABL2BQ9UNT1 228 aa13.75□□□□□ -0.21
VARS2-202ENST00000421263 IFNA4P05014 189 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 SPP1P10451 314 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 RND2P52198 227 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 TMEM268Q5VZI3 342 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 Q8WTZ3 238 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 NARS2Q96I59 477 aaKnown RBP13.74□□□□□ -0.21
VARS2-202ENST00000421263 MRPS26Q9BYN8 205 aaKnown RBP13.74□□□□□ -0.21
VARS2-202ENST00000421263 HRH4Q9H3N8 390 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
VARS2-202ENST00000421263 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
VARS2-202ENST00000421263 DEDDO75618 318 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 ZNF688P0C7X2 276 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 OR10J1P30954 320 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 TCTAP57738 103 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 NMSQ5H8A3 153 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 CSNK1G2-AS1Q8NCQ2 148 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 GLMPQ8WWB7 406 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 PRRT1Q99946 306 aa13.73□□□□□ -0.21
VARS2-202ENST00000421263 DNAH6Q9C0G6 4158 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 ANKRD20A5PA0PJZ0 165 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 HELTA6NFD8 242 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 KNCNA6PVL3 124 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 NXPH3O95157 252 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
VARS2-202ENST00000421263 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
VARS2-202ENST00000421263 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 AP2S1P53680 142 aaPredicted RBP13.72□□□□□ -0.21
VARS2-202ENST00000421263 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
VARS2-202ENST00000421263 OR51S1Q8NGJ8 323 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 DYNC2LI1Q8TCX1 351 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 C2CD4CQ8TF44 421 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 DIRAS2Q96HU8 199 aa13.72□□□□□ -0.21
VARS2-202ENST00000421263 CEBPZOSA8MTT3 80 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 GSTZ1O43708 216 aaPredicted RBP13.71□□□□□ -0.21
VARS2-202ENST00000421263 MIFP14174 115 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 C4BPBP20851 252 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
VARS2-202ENST00000421263 IL18Q14116 193 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
VARS2-202ENST00000421263 ETFRF1Q6IPR1 90 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 NOXA1Q86UR1 476 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 NPIPB3Q92617 1050 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 RAB40CQ96S21 281 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 X6R8D5 127 aa13.71□□□□□ -0.21
VARS2-202ENST00000421263 IGHV4-28A0A0C4DH34 117 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 C11orf94C9JXX5 98 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 BUB3O43684 328 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 NPY1RP25929 384 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 DHRS2Q13268 280 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
VARS2-202ENST00000421263 SOSTQ9BQB4 213 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
VARS2-202ENST00000421263 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
VARS2-202ENST00000421263 APLNQ9ULZ1 77 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 U3KQ87 197 aa13.7□□□□□ -0.22
VARS2-202ENST00000421263 TOMM40O96008 361 aa13.69□□□□□ -0.22
VARS2-202ENST00000421263 IL4P05112 153 aa13.69□□□□□ -0.22
VARS2-202ENST00000421263 RAB2BQ8WUD1 216 aa13.69□□□□□ -0.22
VARS2-202ENST00000421263 PRR13Q9NZ81 148 aa13.69□□□□□ -0.22
VARS2-202ENST00000421263 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
VARS2-202ENST00000421263 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 RD3LP0DJH9 198 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 CCR6P51684 374 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 SUPT4H1P63272 117 aaKnown RBP13.68□□□□□ -0.22
VARS2-202ENST00000421263 PRR20EP86478 221 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 PRR20CP86479 221 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 PRR20DP86480 221 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 PRR20BP86481 221 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 PRR20AP86496 221 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 SCGB3A2Q96PL1 93 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 BCL7BQ9BQE9 202 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 RSL24D1Q9UHA3 163 aaKnown RBP13.68□□□□□ -0.22
VARS2-202ENST00000421263 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 SCP2D1Q9UJQ7 156 aa13.68□□□□□ -0.22
VARS2-202ENST00000421263 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
VARS2-202ENST00000421263 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms