RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CYTL1Q9NRR1 136 aa9.64□□□□□ -0.87
TMEM53-206ENST00000420706 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
TMEM53-206ENST00000420706 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
TMEM53-206ENST00000420706 WDR83OSQ9Y284 106 aa9.64□□□□□ -0.87
TMEM53-206ENST00000420706 OR2T8A6NH00 312 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 TGOLN2O43493 480 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 HNRNPCP07910 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM53-206ENST00000420706 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 GPR183P32249 361 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 ADMP35318 185 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 RUNX1Q01196 453 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 TIGITQ495A1 244 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 FAM209BQ5JX69 171 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 TEPPQ6URK8 271 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 CITED1Q99966 193 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 ARPC5LQ9BPX5 153 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 CHRDL1Q9BU40 450 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF747Q9BV97 191 aa9.63□□□□□ -0.87
TMEM53-206ENST00000420706 LSM4Q9Y4Z0 139 aaKnown RBP9.63□□□□□ -0.87
TMEM53-206ENST00000420706 UBE2L5PA0A1B0GUS4 154 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 KANTRA0A1W2PQU2 76 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 PPP5D1E7EU14 171 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 BCL2L11O43521 198 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 IFNA5P01569 189 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 HSPB1P04792 205 aaKnown RBP9.62□□□□□ -0.87
TMEM53-206ENST00000420706 OR10J1P30954 320 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 ARL3P36405 182 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 OPCMLQ14982 345 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 RPL7L1Q6DKI1 246 aaKnown RBP9.62□□□□□ -0.87
TMEM53-206ENST00000420706 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 BTNL8Q6UX41 500 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 C12orf54Q6X4T0 127 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 NDUFA11Q86Y39 141 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 TRGV9Q99603 122 aa9.62□□□□□ -0.87
TMEM53-206ENST00000420706 PARD6GQ9BYG4 376 aaPredicted RBP9.62□□□□□ -0.87
TMEM53-206ENST00000420706 WDR61Q9GZS3 305 aaKnown RBP9.62□□□□□ -0.87
TMEM53-206ENST00000420706 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 A0A087WW49 117 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 BMPR1BO00238 502 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 NUPL2O15504 423 aaKnown RBP9.61□□□□□ -0.87
TMEM53-206ENST00000420706 FGF7P21781 194 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF90Q03938 601 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF266Q14584 549 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 TMEM182Q6ZP80 229 aaPredicted RBP9.61□□□□□ -0.87
TMEM53-206ENST00000420706 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 SCGB1C1Q8TD33 95 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 MGST2Q99735 147 aa9.61□□□□□ -0.87
TMEM53-206ENST00000420706 BORCS7-ASMTA0A0B4J1R7 106 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 AGPAT2O15120 278 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
TMEM53-206ENST00000420706 MPDU1O75352 247 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 SCGB2A1O75556 95 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 JTBO76095 146 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 OR2C1O95371 312 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 CAMLGP49069 296 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 RAB31Q13636 194 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 SLC45A2Q9UMX9 530 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 BOLA1Q9Y3E2 137 aa9.6□□□□□ -0.87
TMEM53-206ENST00000420706 FBN1P35555 2871 aaKnown RBP9.59□□□□□ -0.87
TMEM53-206ENST00000420706 LINC01619G3V211 115 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 TOMM40O96008 361 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 PSG1P11464 419 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 GATA2P23769 480 aaPredicted RBP9.59□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 HSD17B11Q8NBQ5 300 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 Q8WTZ3 238 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 DPF1Q92782 380 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 RAX2Q96IS3 184 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 GGTLC1Q9BX51 225 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 ZNF471Q9BX82 626 aaPredicted RBP9.59□□□□□ -0.87
TMEM53-206ENST00000420706 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 ARV1Q9H2C2 271 aa9.59□□□□□ -0.87
TMEM53-206ENST00000420706 ATRQ13535 2644 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 CCL24O00175 119 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 LINC00869P0C866 280 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 C4BPBP20851 252 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 RPL29P47914 159 aaKnown RBP9.58□□□□□ -0.88
TMEM53-206ENST00000420706 SELENOTP62341 195 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 RELQ04864 619 aaPredicted RBP9.58□□□□□ -0.88
TMEM53-206ENST00000420706 ZNF616Q08AN1 781 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 MIC13Q5XKP0 118 aa9.58□□□□□ -0.88
TMEM53-206ENST00000420706 GPHB5Q86YW7 130 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms